RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 RTN4IP1Q8WWV3 396 aaPredicted RBP13.91□□□□□ -0.18
PKD1-225ENST00000562297 PDCD10Q9BUL8 212 aa13.91□□□□□ -0.18
PKD1-225ENST00000562297 GLS2Q9UI32 602 aa13.91□□□□□ -0.18
PKD1-225ENST00000562297 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
PKD1-225ENST00000562297 MPTX1A8MV57 137 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 NPIPB11E5RHQ5 1161 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 IGHV1-46P01743 117 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 OR3A1P47881 315 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 ABCA11PQ4W5N1 156 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 PHLDA2Q53GA4 152 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 MOGAT3Q86VF5 341 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 LDLRAD3Q86YD5 345 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 KIRREL1Q96J84 757 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.18
PKD1-225ENST00000562297 DIRAS3O95661 229 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 SFTPCP11686 197 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 CHRNB4P30926 498 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 FAM90A1Q86YD7 464 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
PKD1-225ENST00000562297 COQ2Q96H96 371 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 SHARPINQ9H0F6 387 aa13.9□□□□□ -0.18
PKD1-225ENST00000562297 ACACBO00763 2458 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 IGKV1D-17A0A075B6S4 117 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 PSG2P11465 335 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 COL10A1Q03692 680 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 FGL1Q08830 312 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 TMEM187Q14656 261 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 HMGN3Q15651 99 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 ESCO2Q56NI9 601 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 ADAM5Q6NVV9 412 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 GSG1LQ6UXU4 331 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 NMES1Q9C002 83 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 SEBOXQ9HB31 216 aaPredicted RBP13.89□□□□□ -0.19
PKD1-225ENST00000562297 IL19Q9UHD0 177 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 TRAPPC2LQ9UL33 140 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 ZDHHC8Q9ULC8 765 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 MAB21L2Q9Y586 359 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
PKD1-225ENST00000562297 C13orf42A0A1B0GVH6 325 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 TMEM30CPA0ZSE6 113 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 ZNF737O75373 536 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR4A8P0C604 315 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 PAX5Q02548 391 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 CLLU1Q5K131 121 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 SLC35E4Q6ICL7 350 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 TMEM65Q6PI78 240 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 TMUB2Q71RG4 321 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 DMRTC2Q8IXT2 367 aaPredicted RBP13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR10C1Q96KK4 312 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 GCM1Q9NP62 436 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR1A1Q9P1Q5 309 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 MED19A0JLT2 244 aaPredicted RBP13.88□□□□□ -0.19
PKD1-225ENST00000562297 SHISA9B4DS77 424 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 SNAPC5O75971 98 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 SLC25A4P12235 298 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 C4BPBP20851 252 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 AESQ08117 197 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 IL15RAQ13261 267 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 CDSNQ15517 529 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 SP6Q3SY56 376 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 NCMAPQ5T1S8 102 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 ZNF818PQ6ZRF7 136 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR10J5Q8NHC4 309 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 GLYATL2Q8WU03 294 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 SECTM1Q8WVN6 248 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 TAF9BQ9HBM6 251 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 NGBQ9NPG2 151 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 KIF25Q9UIL4 384 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 OR2W1Q9Y3N9 320 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 AUP1Q9Y679 476 aa13.88□□□□□ -0.19
PKD1-225ENST00000562297 ADH4P08319 380 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 RPA2P15927 270 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 PRDX2P32119 198 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 RND3P61587 244 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 TNFAIP6P98066 277 aaPredicted RBP13.87□□□□□ -0.19
PKD1-225ENST00000562297 LRRC37A5PQ49AS3 106 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 C11orf87Q6NUJ2 197 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 LRTM2Q8N967 370 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 RNASE6Q93091 150 aaKnown RBP13.87□□□□□ -0.19
PKD1-225ENST00000562297 MSI2Q96DH6 328 aaKnown RBP13.87□□□□□ -0.19
PKD1-225ENST00000562297 KCNIP3Q9Y2W7 256 aa13.87□□□□□ -0.19
PKD1-225ENST00000562297 RAI1Q7Z5J4 1906 aaPredicted RBP13.87□□□□□ -0.19
PKD1-225ENST00000562297 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
PKD1-225ENST00000562297 NKX2-6A6NCS4 301 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 FAM90A27PA6NNH2 459 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 HOXB5P09067 269 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 GRNP28799 593 aaKnown RBP13.86□□□□□ -0.19
PKD1-225ENST00000562297 S100A11P31949 105 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 P2RX3P56373 397 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 CYCSP99999 105 aaKnown RBP13.86□□□□□ -0.19
PKD1-225ENST00000562297 SNTB1Q13884 538 aaKnown RBP13.86□□□□□ -0.19
PKD1-225ENST00000562297 TESK1Q15569 626 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 COMMD7Q86VX2 200 aa13.86□□□□□ -0.19
PKD1-225ENST00000562297 FAM185AQ8N0U4 392 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms