RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ENTPD5O75356 428 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 SERPINB7O75635 380 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 MUC1P15941 1255 aaPredicted RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 NCK1P16333 377 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 OTX1P32242 354 aaPredicted RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 RBM34P42696 430 aaKnown RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 OMPP47874 163 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 CX3CR1P49238 355 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 HCCSP53701 268 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 RAP1BP61224 184 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 ACTA2P62736 377 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 RAP1AP62834 184 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 RPL31P62899 125 aaKnown RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 ACTG2P63267 376 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 ACTC1P68032 377 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 ACTA1P68133 377 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 DEFA5Q01523 94 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 PPP1R8Q12972 351 aaKnown RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 EDDM3AQ14507 147 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 C2orf76Q3KRA6 126 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 ZBED5Q49AG3 693 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 AGBL2Q5U5Z8 902 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 SMARCD3Q6STE5 483 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 MSANTD1Q6ZTZ1 278 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 DCXRQ7Z4W1 244 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 C5orf24Q7Z6I8 188 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 OSR2Q8N2R0 312 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 OR4X2Q8NGF9 303 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 OR8D4Q8NGM9 314 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 OR52J3Q8NH60 311 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 NDNFQ8TB73 568 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 SLC26A7Q8TE54 656 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 GATAD1Q8WUU5 269 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 RNF170Q96K19 258 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 PRRC1Q96M27 445 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 ERMAPQ96PL5 475 aaPredicted RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 OR8B4Q96RC9 309 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 HSPB9Q9BQS6 159 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 CHST6Q9GZX3 395 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 TSPYL1Q9H0U9 437 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 TLNRD1Q9H1K6 362 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 EGLN3Q9H6Z9 239 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 DCLRE1BQ9H816 532 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 NIPAL2Q9H841 368 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 NMNAT1Q9HAN9 279 aaPredicted RBP4.1□□□□□ -1.75
UBR1-203ENST00000562173 ABCB10Q9NRK6 738 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 VNN3Q9NY84 501 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 SMAD5-AS1Q9Y6J3 95 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 V9GYQ6 96 aa4.1□□□□□ -1.75
UBR1-203ENST00000562173 IGHV2-26A0A0B4J1V2 119 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 TRAV39A0A0B4J263 110 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF732B4DXR9 585 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 XKRYO14609 159 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 BIRC5O15392 142 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 MAGEB4O15481 346 aaPredicted RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 NDUFA2O43678 99 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 B3GALNT1O75752 331 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 IFNW1P05000 195 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 IGHV1-8P0DP01 117 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 TROVE2P10155 538 aaKnown RBP eCLIP4.09□□□□□ -1.75
UBR1-203ENST00000562173 MYCNOSP40205 109 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 CAV3P56539 151 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF121P58317 390 aaPredicted RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 TNFRSF9Q07011 255 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 KIAA0141Q14154 515 aaPredicted RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 KCNJ8Q15842 424 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 TNFAIP8L3Q5GJ75 292 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 NANOGP8Q6NSW7 305 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 HAGHLQ6PII5 290 aaPredicted RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF730Q6ZMV8 503 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZDHHC21Q8IVQ6 265 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF695Q8IW36 515 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 OR5K1Q8NHB7 308 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 UBALD1Q8TB05 177 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 OR5P3Q8WZ94 311 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 DCUN1D4Q92564 292 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 SLAMF6Q96DU3 332 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 COPS4Q9BT78 406 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 DNAJC4Q9NNZ3 241 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 RAB18Q9NP72 206 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 ISYNA1Q9NPH2 558 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 THUMPD1Q9NXG2 353 aaKnown RBP4.09□□□□□ -1.75
UBR1-203ENST00000562173 ZNF581Q9P0T4 197 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 CACNG5Q9UF02 275 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 HHLA2Q9UM44 414 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 COMMD3-BMI1R4GMX3 469 aa4.09□□□□□ -1.75
UBR1-203ENST00000562173 IGKV1-27A0A075B6S5 117 aa4.08□□□□□ -1.76
UBR1-203ENST00000562173 DHRS12A0PJE2 317 aa4.08□□□□□ -1.76
UBR1-203ENST00000562173 TMEM120BA0PK00 339 aa4.08□□□□□ -1.76
UBR1-203ENST00000562173 IZUMO1RA6ND01 250 aa4.08□□□□□ -1.76
UBR1-203ENST00000562173 ZNF736B4DX44 427 aaPredicted RBP4.08□□□□□ -1.76
UBR1-203ENST00000562173 MTRF1O75570 445 aaKnown RBP4.08□□□□□ -1.76
UBR1-203ENST00000562173 NDUFB2O95178 105 aa4.08□□□□□ -1.76
UBR1-203ENST00000562173 DUS4LO95620 317 aaKnown RBP4.08□□□□□ -1.76
UBR1-203ENST00000562173 SLC2A2P11168 524 aaPredicted RBP4.08□□□□□ -1.76
UBR1-203ENST00000562173 GP9P14770 177 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms