RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 AWAT2Q6E213 333 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 TMEM219Q86XT9 240 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 TMEM104Q8NE00 496 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 OR2T6Q8NHC8 308 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 MMP28Q9H239 520 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 TRAV39A0A0B4J263 110 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 M0QZ24 198 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 F2RL2O00254 374 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 RGS10O43665 173 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 ORC5O43913 435 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 TNFAIP8O95379 198 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 GLAP06280 429 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 UCHL1P09936 223 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 NFYBP25208 207 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 CEACAM3P40198 252 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 HERPUD1Q15011 391 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 KCTD21Q4G0X4 260 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 ATAD3CQ5T2N8 411 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 SIGIRRQ6IA17 410 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 PRSS48Q7RTY5 328 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 C16orf82Q7Z2V1 217 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 OR52M1Q8NGK5 317 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 Q96M66 194 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 CCDC90BQ9GZT6 254 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 PSG11Q9UQ72 335 aa16.56■□□□□ 0.24
TPM1-232ENST00000561425 PKD1L1Q8TDX9 2849 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A9PA6NNJ1 464 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 MGMTP16455 207 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 SRMP19623 302 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 BRS3P32247 399 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 SSTR5P35346 364 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 BLCAPP62952 87 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 TMEM91Q6ZNR0 172 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 RFESDQ8TAC1 157 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 TMED9Q9BVK6 235 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 WNT10AQ9GZT5 417 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 LIN7BQ9HAP6 207 aa16.55■□□□□ 0.24
TPM1-232ENST00000561425 CA11O75493 328 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 CPEP16870 476 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 LOXL3P58215 753 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 MLLT11Q13015 90 aaPredicted RBP16.54■□□□□ 0.24
TPM1-232ENST00000561425 RBM39Q14498 530 aaKnown RBP16.54■□□□□ 0.24
TPM1-232ENST00000561425 FBLN7Q53RD9 439 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 LIPKQ5VXJ0 399 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 Q6ZS46 218 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 CEACAM19Q7Z692 300 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 THNSL2Q86YJ6 484 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 C8orf31Q8N9H6 132 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 UFD1Q92890 307 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 SELENOIQ9C0D9 397 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 PRSS22Q9GZN4 317 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 BANF2Q9H503 90 aa16.54■□□□□ 0.24
TPM1-232ENST00000561425 MCRIP1C9JLW8 97 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 MRPS14O60783 128 aaKnown RBP16.53■□□□□ 0.24
TPM1-232ENST00000561425 UBBP0CG47 229 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 FUT3P21217 361 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 GLT8D1Q68CQ7 371 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 RAB12Q6IQ22 244 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 CCDC144NLQ6NUI1 221 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 MMP27Q9H306 513 aa16.53■□□□□ 0.24
TPM1-232ENST00000561425 H3BUI4 141 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 ARHGDIBP52566 201 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 QRFPP83859 136 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 HABP2Q14520 560 aaPredicted RBP16.52■□□□□ 0.24
TPM1-232ENST00000561425 TRAM1Q15629 374 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 Q3ZCU0 254 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 HSD17B12Q53GQ0 312 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 LINC00311Q8N616 119 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 KLHDC1Q8N7A1 406 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 LEAP2Q969E1 77 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 ARL11Q969Q4 196 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 RBM14Q96PK6 669 aaKnown RBP16.52■□□□□ 0.24
TPM1-232ENST00000561425 OCSTAMPQ9BR26 566 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 AMMECR1Q9Y4X0 333 aaPredicted RBP16.52■□□□□ 0.24
TPM1-232ENST00000561425 PEX16Q9Y5Y5 336 aa16.52■□□□□ 0.24
TPM1-232ENST00000561425 AIPO00170 330 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 SLC22A1O15245 554 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 CRTAPO75718 401 aaPredicted RBP16.51■□□□□ 0.23
TPM1-232ENST00000561425 OR2F2O95006 317 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 AMY1AP04745 511 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 AMY2AP04746 511 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 VSIG8P0DPA2 414 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 CD24P25063 80 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 PSMA1P25786 263 aaKnown RBP16.51■□□□□ 0.23
TPM1-232ENST00000561425 ZNF773Q6PK81 442 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 Q6ZTK2 550 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 SVOPQ8N4V2 548 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 MGLLQ99685 303 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 CST11Q9H112 138 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
TPM1-232ENST00000561425 GFOD1Q9NXC2 390 aa16.51■□□□□ 0.23
TPM1-232ENST00000561425 CMYA5Q8N3K9 4069 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 A0A1W2PPI3 338 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 IGHV3-7P01780 117 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 MNDAP41218 407 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 MADCAM1Q13477 382 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 DIAPH2-AS1Q14236 149 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 LTC4SQ16873 150 aa16.5■□□□□ 0.23
TPM1-232ENST00000561425 SYT6Q5T7P8 510 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms