RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SLC26A10Q8NG04 563 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR4M1Q8NGD0 313 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR52H1Q8NGJ2 320 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR5M1Q8NGP8 315 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR56B4Q8NH76 319 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 SMIM4Q8WVI0 70 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 RNF133Q8WVZ7 376 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TSEN15Q8WW01 171 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 SPTSSAQ969W0 71 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TMEM106AQ96A25 262 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 HAVCR1Q96D42 359 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 HYLS1Q96M11 299 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR2M2Q96R28 347 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ABHD1Q96SE0 405 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PDCD1LG2Q9BQ51 273 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ABHD6Q9BV23 337 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PPIL3Q9H2H8 161 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 GPN1Q9HCN4 374 aaPredicted RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 TMEM138Q9NPI0 162 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 POLE4Q9NR33 117 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 MCUBQ9NWR8 336 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 SLCO1C1Q9NYB5 712 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 PLEK2Q9NYT0 353 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 MRPL15Q9P015 296 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 CYB5R1Q9UHQ9 305 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 MRM2Q9UI43 246 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 ZNF391Q9UJN7 358 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 DKKL1Q9UK85 242 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 OR52A1Q9UKL2 312 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 TBC1D24Q9ULP9 559 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 MRPS7Q9Y2R9 242 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 AK6Q9Y3D8 172 aaKnown RBP2.63□□□□□ -1.99
SPG11-225ENST00000561391 CACNG2Q9Y698 323 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 ARFGEF3Q5TH69 2177 aa2.63□□□□□ -1.99
SPG11-225ENST00000561391 HEATR1Q9H583 2144 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 DNAH3Q8TD57 4116 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 LINC00854A0A1B0GVQ3 168 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 A0A1W2PPK0 400 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GGT3PA6NGU5 568 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TVP23AA6NH52 213 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SNRPGP15A8MWD9 76 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ZNF878C9JN71 531 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 DCTN6O00399 190 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SLC17A2O00624 439 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PPIHO43447 177 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 SYT7O43581 403 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GMFGO60234 142 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SS18L1O75177 396 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 MTRF1O75570 445 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 TCRBP04435 133 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ALDOBP05062 364 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 IL5P05113 134 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 EIF4EP06730 217 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 YES1P07947 543 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MELTFP08582 738 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 QDPRP09417 244 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GSTT2P0CG29 244 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PGA4P0DJD7 388 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PGA3P0DJD8 388 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CTLA4P16410 223 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ATF1P18846 271 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TBPP20226 339 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 RAB3AP20336 220 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MSR1P21757 451 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PTAFRP25105 342 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 AZGP1P25311 298 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 STOMP27105 288 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 HTR2CP28335 458 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PRSS3P35030 304 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 PTGDSP41222 190 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CSNK1A1P48729 337 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ZNF133P52736 654 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 BIDP55957 195 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CAV3P56539 151 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CARD18P57730 90 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 ACTBP60709 375 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MRPS15P82914 257 aaKnown RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 GALK2Q01415 458 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 POU3F1Q03052 451 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 SCRN3Q0VDG4 424 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 FOXF1Q12946 379 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 CBX3Q13185 183 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MAB21L1Q13394 359 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 GPR176Q14439 515 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 INSL4Q14641 139 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 MEF2DQ14814 521 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 P2RY14Q15391 338 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 TATDN3Q17R31 274 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 C2orf76Q3KRA6 126 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 KLF17Q5JT82 389 aaPredicted RBP2.62□□□□□ -1.99
SPG11-225ENST00000561391 WDR38Q5JTN6 314 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 C10orf128Q5T292 105 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 FAM27BQ5VT28 67 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 METTL11BQ5VVY1 283 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 OR7E24Q6IFN5 339 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 NHLRC1Q6VVB1 395 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 BTN2A1Q7KYR7 527 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 FCRLAQ7L513 359 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 SSX6Q7RTT6 188 aa2.62□□□□□ -1.99
SPG11-225ENST00000561391 NUFIP2Q7Z417 695 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms