RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CHCHD3Q9NX63 227 aaKnown RBP4.91□□□□□ -1.62
LRRC28-220ENST00000561253 TREM2Q9NZC2 230 aa4.91□□□□□ -1.62
LRRC28-220ENST00000561253 NOP16Q9Y3C1 178 aaKnown RBP4.91□□□□□ -1.62
LRRC28-220ENST00000561253 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
LRRC28-220ENST00000561253 DYSFO75923 2080 aa4.91□□□□□ -1.62
LRRC28-220ENST00000561253 YLPM1P49750 1951 aaKnown RBP4.91□□□□□ -1.62
LRRC28-220ENST00000561253 ANK2Q01484 3957 aa4.9□□□□□ -1.62
LRRC28-220ENST00000561253 ARHGAP32A7KAX9 2087 aa4.9□□□□□ -1.62
LRRC28-220ENST00000561253 ANXA2P2A6NMY6 339 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF879B4DU55 563 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF732B4DXR9 585 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 F8VVB4 439 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 F8VWA3 439 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 J3QT63 122 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 CDIPTO14735 213 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 XRCC3O43542 346 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 BUB3O43684 328 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 SULT1B1O43704 296 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 SYNGR1O43759 233 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 GATBO75879 557 aaKnown RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ALDOBP05062 364 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ERCC1P07992 297 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 OCM2P0CE71 109 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 PGA5P0DJD9 388 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 SLC25A16P16260 332 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 EEF1B2P24534 225 aaKnown RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 AZGP1P25311 298 aaKnown RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 IL2RGP31785 369 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 BTG1P62324 171 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 FABP5Q01469 135 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 HFEQ30201 348 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF404Q494X3 552 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ARMCX4Q5H9R4 360 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 PLCXD3Q63HM9 321 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 FAM166AQ6J272 317 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ASCL4Q6XD76 172 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF841Q6ZN19 808 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 LRRTM1Q86UE6 522 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 LRRC28Q86X40 367 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-220ENST00000561253 COMMD2Q86X83 199 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 MS4A15Q8N5U1 240 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 Q8NFD4 153 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 OR13C3Q8NGS6 347 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 OR13C9Q8NGT0 318 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 OR10Z1Q8NGY1 313 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 CLDND2Q8NHS1 167 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 CCL17Q92583 94 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 FCGR1BQ92637 280 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 UFD1Q92890 307 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 TECTBQ96PL2 329 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 MICU1Q9BPX6 476 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 RTL8AQ9BWD3 113 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 REG4Q9BYZ8 158 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 PKIBQ9C010 78 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 CCDC90BQ9GZT6 254 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 WDR13Q9H1Z4 485 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 C1orf123Q9NWV4 160 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 TAS2R4Q9NYW5 299 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 MTCH1Q9NZJ7 389 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 ZNF222Q9UK12 451 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 NPTNQ9Y639 398 aa4.9□□□□□ -1.63
LRRC28-220ENST00000561253 IGKV1D-17A0A075B6S4 117 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 A0A087WXM4 84 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 A0A0B4J293 547 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 A0A1B0GUV1 79 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 A0A1B0GW55 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 TRDV1A0A1B0GX56 115 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 A0A1W2PPK0 400 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 CEACAM18A8MTB9 384 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 CLDN25C9JDP6 229 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 LGALS8O00214 317 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 GABRPO00591 440 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 AKR7A2O43488 359 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 CYB5R3P00387 301 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 IGHV2-5P01817 119 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L2P0CJ85 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L3P0CJ86 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L4P0CJ87 422 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L5P0CJ88 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L6P0CJ89 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DUX4L7P0CJ90 424 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 USF1P22415 310 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 GALP22466 123 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PRKACBP22694 351 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 CPT2P23786 658 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 GPR6P46095 362 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 HAAOP46952 286 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ALDH3B2P48448 385 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PPP5CP53041 499 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 DVL1P1P54792 670 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-220ENST00000561253 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PAX2Q02962 417 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 IL24Q13007 206 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 GAGE5Q13069 117 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 GAGE6Q13070 117 aa4.89□□□□□ -1.63
LRRC28-220ENST00000561253 PDZK1IP1Q13113 114 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms