RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FAM19A4Q96LR4 140 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR4K3Q96R72 315 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR7D2Q96RA2 312 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 TRIB3Q96RU7 358 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 HDHD3Q9BSH5 251 aaPredicted RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 CCDC90BQ9GZT6 254 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 PLSCR3Q9NRY6 295 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 RBFOX1Q9NWB1 397 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 TAS2R5Q9NYW4 299 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 RNF7Q9UBF6 113 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 OR12D3Q9UGF7 316 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 RSL24D1Q9UHA3 163 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 LINC00527Q9UJ94 153 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 SSR3Q9UNL2 185 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 NDUFAF1Q9Y375 327 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 WASHC3Q9Y3C0 194 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 UFC1Q9Y3C8 167 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 RLFQ13129 1914 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 CFAP65Q6ZU64 1925 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 NUP155O75694 1391 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 KIF24Q5T7B8 1368 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 GRIN2AQ12879 1464 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 PCF11O94913 1555 aaKnown RBP1.55□□□□□ -2.16
RTF1-207ENST00000561076 CEP170Q5SW79 1584 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 DIP2BQ9P265 1576 aa1.55□□□□□ -2.16
RTF1-207ENST00000561076 IGKV2D-30A0A075B6S6 120 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 A0A087WUJ7 227 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 IGHV6-1A0A0B4J1U7 121 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 A0A1B0GUV1 79 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 A0A1B0GXF2 115 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 A0A1W2PP18 115 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ZNF729A6NN14 1252 aaPredicted RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 PRSS44E7EML9 344 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 E7EQ34 232 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 LGALS9O00182 355 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 GPR31O00270 319 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 PIRO00625 290 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SS18L1O75177 396 aaPredicted RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 CDRT1O95170 752 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CXorf1O96002 111 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 IGHV3-13P01766 116 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 APOA2P02652 100 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 REG1AP05451 166 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ATP5G1P05496 136 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 GUSBP08236 651 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 OR10J4P0C629 311 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 TDGF1P13385 188 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 PLA2G2AP14555 144 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CTLA4P16410 223 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CRISP2P16562 243 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ORM2P19652 201 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 KLK2P20151 261 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 S100A1P23297 94 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 S100A2P29034 98 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 IMPA1P29218 277 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CRABP2P29373 138 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 PHBP35232 272 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 RBMXP38159 391 aaKnown RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 NMUP48645 174 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SRP9P49458 86 aaKnown RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 THBS3P49746 956 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 TDGF1P3P51864 188 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 PSG4Q00888 419 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 FABP5Q01469 135 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 IFITM2Q01629 132 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 GNA12Q03113 381 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CAV1Q03135 178 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ATP5G2Q06055 141 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 MEF2CQ06413 473 aaPredicted RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 LY6DQ14210 128 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 IHHQ14623 411 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 KIAA0040Q15053 153 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 LRRC26Q2I0M4 334 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ZNF404Q494X3 552 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 CASC10Q5T4H9 136 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 HES3Q5TGS1 186 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 TSPO2Q5TGU0 170 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SPATA31B1PQ5VZV4 182 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 FAAP20Q6NZ36 180 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 FBXL22Q6P050 247 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 GRINAQ7Z429 371 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 DOLPP1Q86YN1 238 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 Q8N1X5 172 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SLC35F6Q8N357 371 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SLC25A45Q8N413 288 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SMIM20Q8N5G0 67 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 EIF4E3Q8N5X7 224 aaKnown RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 DRAM1Q8N682 238 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ZNF525Q8N782 197 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 OR5H2Q8NGV7 314 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 OR10K1Q8NGX5 313 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 OR52P1PQ8NH57 321 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 C2orf15Q8WU43 125 aaKnown RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 CT55Q8WUE5 264 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 SRSF12Q8WXF0 261 aaKnown RBP1.54□□□□□ -2.16
RTF1-207ENST00000561076 GALMQ96C23 342 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 ROPN1LQ96C74 230 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 RNF185Q96GF1 192 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 TMEM101Q96IK0 257 aa1.54□□□□□ -2.16
RTF1-207ENST00000561076 KCNS1Q96KK3 526 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms