RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 AESQ08117 197 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 TRAM1Q15629 374 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 PAN3Q58A45 887 aaKnown RBP8.66□□□□□ -1.02
TPM1-227ENST00000560970 BAIAP2L2Q6UXY1 529 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 CDH26Q8IXH8 852 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 CHST4Q8NCG5 386 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 TMEM104Q8NE00 496 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 FOXRED1Q96CU9 486 aaPredicted RBP8.66□□□□□ -1.02
TPM1-227ENST00000560970 AJUBAQ96IF1 538 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 UQCC2Q9BRT2 126 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 BANF2Q9H503 90 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 NECAP2Q9NVZ3 263 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 LINC00312Q9Y6C7 94 aa8.66□□□□□ -1.02
TPM1-227ENST00000560970 TRDV1A0A1B0GX56 115 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 hCG_1809904A0A1W2PP81 198 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 A0A1W2PR64 198 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 A0A1W2PRV1 198 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 ODAMA1E959 279 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 OR7C1O76099 320 aaPredicted RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 CSTBP04080 98 aaKnown RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 CD37P11049 281 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 COX7A1P24310 79 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 PAX6P26367 422 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 CALRP27797 417 aaKnown RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 SOX6P35712 828 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 GDNFP39905 211 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 MEF2CQ06413 473 aaPredicted RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 NSUN5P1Q3KNT7 163 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 KRBOX4Q5JUW0 171 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 C1orf100Q5SVJ3 147 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 RSBN1Q5VWQ0 802 aaPredicted RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 NDUFA11Q86Y39 141 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 OR4F17Q8NGA8 305 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 S100ZQ8WXG8 99 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 Q96M66 194 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 ZNF714Q96N38 554 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 OR4F4Q96R69 305 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 S100A13Q99584 98 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 SLIRPQ9GZT3 109 aaKnown RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 NXF2Q9GZY0 626 aaKnown RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 IFT22Q9H7X7 185 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 HEXA-AS1Q9H8Q6 139 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 AURKAIP1Q9NWT8 199 aaPredicted RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 KIF25Q9UIL4 384 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 TCF19Q9Y242 345 aa8.65□□□□□ -1.02
TPM1-227ENST00000560970 AK6Q9Y3D8 172 aaKnown RBP8.65□□□□□ -1.02
TPM1-227ENST00000560970 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 hADV38S2A0JD32 116 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 ZNF780AO75290 641 aaPredicted RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 IL1AP01583 271 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 RBP4P02753 201 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 IGHV1-8P0DP01 117 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 VSIG8P0DPA2 414 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 GTF2F2P13984 249 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 MGMTP16455 207 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 LGALS4P56470 323 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 UNC119Q13432 240 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 DCTN2Q13561 401 aaKnown RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 C17orf58Q2M2W7 97 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 MPV17LQ2QL34 196 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 LDLRAD2Q5SZI1 272 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 UTF1Q5T230 341 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 PRAMEF5Q5TYX0 476 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 GLT8D1Q68CQ7 371 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 SIGIRRQ6IA17 410 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 OR10K2Q6IF99 312 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 TRAPPC6BQ86SZ2 158 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 LINC00596Q86U02 117 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 RTN4RL2Q86UN3 420 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 LYG1Q8N1E2 194 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 Q8N2B8 174 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 OR13A1Q8NGR1 328 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 MCFD2Q8NI22 146 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 CORO2AQ92828 525 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 FAM46BQ96A09 425 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 KCTD7Q96MP8 289 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 DPCDQ9BVM2 203 aaPredicted RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 PLGRKTQ9HBL7 147 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
TPM1-227ENST00000560970 TXNL4BQ9NX01 149 aaKnown RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 UBE2J1Q9Y385 318 aaPredicted RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 TBL2Q9Y4P3 447 aaKnown RBP8.64□□□□□ -1.03
TPM1-227ENST00000560970 A0A0A6YYD4 124 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 TRAV39A0A0B4J263 110 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 FAM172BPA6NC97 362 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 ODF3BA8MYP8 253 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 SLC17A2O00624 439 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 CRTAPO75718 401 aaPredicted RBP8.63□□□□□ -1.03
TPM1-227ENST00000560970 ARL6IP5O75915 188 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 MPIG6BO95866 241 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 HTR2CP28335 458 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 GLP1RP43220 463 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 OR10A3P58181 314 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms