RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CD24P25063 80 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 CD34P28906 385 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 MNDAP41218 407 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 GP2P55259 537 aaKnown RBP10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 PAX5Q02548 391 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 SYT6Q5T7P8 510 aaPredicted RBP10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR10K2Q6IF99 312 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 SVOPQ8N4V2 548 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 DTX3Q8N9I9 347 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR4K15Q8NH41 348 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 TOMM40LQ969M1 308 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 RPEQ96AT9 228 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 Q96M66 194 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 NEDD4LQ96PU5 975 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 TMEM59Q9BXS4 323 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 MMP28Q9H239 520 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 ACOT13Q9NPJ3 140 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 SIGLEC9Q9Y336 463 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 A0A087X0M5 115 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 A0A1B0GX30 115 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A10PA6NDY2 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A18PA6NE21 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A16PA6NEW6 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A20PA6NIJ5 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A7PA6NKC0 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A22PA8MWA6 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A12PA8MX19 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A5PA8MXJ8 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A23PA8MXZ1 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 J3QR06 171 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 SDCBPO00560 298 aaPredicted RBP10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 PEX14O75381 377 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 IGLV1-47P01700 117 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 MT-ND4P03905 459 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A15PP0C7V4 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A13PP0C7W8 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A14PP0C7W9 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FAM90A24PP0C7X0 464 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 CGB3P0DN86 165 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 CGB7P0DN87 165 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 GABARAPL2P60520 117 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 FABP5Q01469 135 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 P2RY14Q15391 338 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 C1orf100Q5SVJ3 147 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 UTF1Q5T230 341 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 CCDC144NLQ6NUI1 221 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 CCBE1Q6UXH8 406 aaPredicted RBP10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 TMEM91Q6ZNR0 172 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 LYPD6Q86Y78 171 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR10A7Q8NGE5 316 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 OR6M1Q8NGM8 313 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 KCNG3Q8TAE7 436 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 RAB9BQ9NP90 201 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 PSG11Q9UQ72 335 aa10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 RRP15Q9Y3B9 282 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 AK6Q9Y3D8 172 aaKnown RBP10.45□□□□□ -0.74
CTDSPL2-209ENST00000560620 IGHV3-43A0A0B4J1X8 118 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 A0A1W2PPE3 182 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 A6NDX4 124 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 NPIPB11E5RHQ5 1161 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 SPINT2O43291 252 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 DENRO43583 198 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 PDCD6O75340 191 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 IGHV3-43DP0DP04 118 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 VSIG10L2P0DP72 767 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 PSMB9P28065 219 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 DYNLT3P51808 116 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 PROK1P58294 105 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 MADCAM1Q13477 382 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 C6orf183Q5T699 404 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 KCNK15Q9H427 330 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 RANBP3Q9H6Z4 567 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 KCNIP1Q9NZI2 227 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 RCC2Q9P258 522 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 FBLN5Q9UBX5 448 aa10.44□□□□□ -0.74
CTDSPL2-209ENST00000560620 TIMM23O14925 209 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 SLC22A1O15245 554 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 ORC5O43913 435 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 CA11O75493 328 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 BPNT1O95861 308 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 ARSBP15848 533 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 MYL9P24844 172 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 KIR2DS4P43632 304 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 RPS27AP62979 156 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 HABP2Q14520 560 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 RAB11BQ15907 218 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 Q6ZTK2 550 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 AKR1E2Q96JD6 320 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 CITED1Q99966 193 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 PRSS22Q9GZN4 317 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 LINC00574Q9H8X3 128 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 CHMP1AQ9HD42 196 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 GNG12Q9UBI6 72 aa10.43□□□□□ -0.74
CTDSPL2-209ENST00000560620 OOSP1A8MZH6 123 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms