RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
TSPAN3-208ENST00000560514 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
TSPAN3-208ENST00000560514 KIF25Q9UIL4 384 aa13.85□□□□□ -0.19
TSPAN3-208ENST00000560514 GNG8Q9UK08 70 aa13.85□□□□□ -0.19
TSPAN3-208ENST00000560514 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
TSPAN3-208ENST00000560514 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 IGKV1-12A0A0C4DH73 117 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 I3L521 148 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 MOSP00540 346 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 IGKV1D-12P01611 117 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 MT-ND2P03891 347 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 CGB3P0DN86 165 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 CGB7P0DN87 165 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 RUNX1Q01196 453 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 ZFP1Q6P2D0 407 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 Q8N6K4 173 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 OR10A7Q8NGE5 316 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 OR8H1Q8NGG4 311 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 OR51T1Q8NGJ9 327 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 OR5D18Q8NGL1 313 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 ADAT3Q96EY9 351 aaPredicted RBP13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 MRPL48Q96GC5 212 aaKnown RBP13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 MBOAT4Q96T53 435 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 FRRS1LQ9P0K9 344 aa13.84□□□□□ -0.19
TSPAN3-208ENST00000560514 DAPL1A0PJW8 107 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 H0YJX3 145 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 SLC16A6O15403 523 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 APOL3O95236 402 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 IL3RAP26951 378 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 CD1BP29016 333 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 KIR3DL2P43630 455 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 ASPHD1Q5U4P2 390 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 ACBD7Q8N6N7 88 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 MRGPRDQ8TDS7 321 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 FGGYQ96C11 551 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 HSPB9Q9BQS6 159 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 SPATA25Q9BR10 227 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 CHCHD6Q9BRQ6 235 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 OR51J1Q9H342 316 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 NCOR1P1Q9H4R4 102 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 FAM118AQ9NWS6 357 aa13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 EXOGQ9Y2C4 368 aaKnown RBP13.83□□□□□ -0.2
TSPAN3-208ENST00000560514 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 NPIPB11E5RHQ5 1161 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 IFNA6P05013 189 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 IGF1P05019 195 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 IGHV4-30-4P0DP06 118 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 ALDH3A2P51648 485 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 GNB1P62873 340 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 SAXO1Q8IYX7 474 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 MYOZ3Q8TDC0 251 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 SPACA5Q96QH8 159 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 NR1H4Q96RI1 486 aaPredicted RBP13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 LINC00574Q9H8X3 128 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 ZNF107Q9UII5 783 aaPredicted RBP13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 ZNF580Q9UK33 172 aa13.82□□□□□ -0.2
TSPAN3-208ENST00000560514 TMEM225BP0DP42 221 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 SSTR5P35346 364 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 MRPL28Q13084 256 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 PYDC1Q8WXC3 89 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 DLX4Q92988 240 aaPredicted RBP13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 OR4C12Q96R67 309 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 KLK15Q9H2R5 256 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 PLSCR3Q9NRY6 295 aa13.81□□□□□ -0.2
TSPAN3-208ENST00000560514 LINC01619G3V211 115 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 HTR1AP08908 422 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 OR8U9P0C7N5 309 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 DBTP11182 482 aaKnown RBP13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 PITPNAQ00169 270 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 CDK5R1Q15078 307 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 LYPD6Q86Y78 171 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 FAM71E2Q8N5Q1 922 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 Q96MT0 163 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
TSPAN3-208ENST00000560514 OR4C45A6NMZ5 311 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 H3BNX3 289 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 EI24O14681 340 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 SLC2A2P11168 524 aaPredicted RBP13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 MYF6P23409 242 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 KCNJ3P48549 501 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 MTNR1BP49286 362 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 SLURP1P55000 103 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 F2RL1P55085 397 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 NANOS3P60323 173 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 ALKBH1Q13686 389 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 GALEQ14376 348 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 SYS1Q8N2H4 156 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 RHOXF1Q8NHV9 184 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 RTN4IP1Q8WWV3 396 aaPredicted RBP13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 ARPC1AQ92747 370 aa13.79□□□□□ -0.2
TSPAN3-208ENST00000560514 J3QLW9 94 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms