RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 FOXI3A8MTJ6 420 aaPredicted RBP9.78□□□□□ -0.84
LDLR-212ENST00000560467 DISC1C4P0D8 188 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TRIM77I1YAP6 450 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 SLC33A1O00400 549 aaPredicted RBP9.78□□□□□ -0.84
LDLR-212ENST00000560467 ZNF205O95201 554 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 GYPAP02724 150 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 CTXN2P0C2S0 81 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 AKAIN1P0CW23 69 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 DYRK1AQ13627 763 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 BAK1Q16611 211 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 AWAT1Q58HT5 328 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 SPRNQ5BIV9 151 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
LDLR-212ENST00000560467 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 ATPAF1Q5TC12 328 aaPredicted RBP9.78□□□□□ -0.84
LDLR-212ENST00000560467 STEAP3Q658P3 488 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 SIGIRRQ6IA17 410 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TMEM229BQ8NBD8 167 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TMEM185AQ8NFB2 350 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 OR4K15Q8NH41 348 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 ANGPTL6Q8NI99 470 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 NUDCD2Q8WVJ2 157 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 SDSLQ96GA7 329 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 SLC6A7Q99884 636 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 PPA2Q9H2U2 334 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TMEM165Q9HC07 324 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 IL36RNQ9UBH0 155 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 KLK11Q9UBX7 282 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 DYSFO75923 2080 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 IGKV1D-17A0A075B6S4 117 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 MEIKINA0A087WXM9 373 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 TRAV20A0A0B4J274 112 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 A0A1W2PPH5 198 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 MEIOCA2RUB1 952 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 GPR37O15354 613 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 ADAM20O43506 726 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 NDUFB7P17568 137 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 GZMHP20718 246 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 TSPAN5P62079 268 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 SRSF7Q16629 238 aaKnown RBP eCLIP9.77□□□□□ -0.85
LDLR-212ENST00000560467 KRBOX4Q5JUW0 171 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 C6orf183Q5T699 404 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 STUMQ69YW2 141 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 SLC35E4Q6ICL7 350 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 DCDC5Q6ZRR9 648 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 HOGA1Q86XE5 327 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 OR5H2Q8NGV7 314 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 ENKURQ8TC29 256 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 CCL13Q99616 98 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 ESM1Q9NQ30 184 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 ING3Q9NXR8 418 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 OR6C3Q9NZP0 311 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 MIOXQ9UGB7 285 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 SCP2D1Q9UJQ7 156 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 KCNK7Q9Y2U2 307 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 CACNG2Q9Y698 323 aa9.77□□□□□ -0.85
LDLR-212ENST00000560467 FAM240BA0A1B0GVZ2 78 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 MEIS3P1A6NDR6 274 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 K7N7A8 449 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 SIGLEC5O15389 551 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 RAB3DO95716 219 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 TK1P04183 234 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 CSN2P05814 226 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 PTHLHP12272 177 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 HLA-DMAP28067 261 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 GLP1RP43220 463 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 CEBPDP49716 269 aaPredicted RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 EDDM3BP56851 147 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 GUCA2AQ02747 115 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 ASAH1Q13510 395 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 ATXN7L3Q14CW9 347 aaPredicted RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 TRIM16LQ309B1 348 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 FAM201AQ5SY85 155 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 ZNF782Q6ZMW2 699 aaPredicted RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 ZNF788Q6ZQV5 615 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 LYSMD2Q8IV50 215 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 CD177Q8N6Q3 437 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 MINDY2Q8NBR6 621 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 OR8B3Q8NGG8 313 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 OR8B2Q96RD0 313 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 TMPRSS13Q9BYE2 586 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 NECAP2Q9NVZ3 263 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 SLC25A10Q9UBX3 287 aaPredicted RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 RBMX2Q9Y388 322 aaKnown RBP9.76□□□□□ -0.85
LDLR-212ENST00000560467 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
LDLR-212ENST00000560467 TRGV10A0A0A0MS01 117 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 hADV38S2A0JD32 116 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 TRDCB7Z8K6 153 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 SPINT2O43291 252 aa9.75□□□□□ -0.85
LDLR-212ENST00000560467 LYRM1O43325 122 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms