RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TMEM11P17152 192 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 CD33P20138 364 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 RANBP1P43487 201 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 WNT4P56705 351 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 SLC35B1P78383 322 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 DOC2BQ14184 412 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 C9orf152Q5JTZ5 239 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 XAF1Q6GPH4 301 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 RNF144BQ7Z419 303 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 C1QL4Q86Z23 238 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 OR51D1Q8NGF3 324 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 CHPT1Q8WUD6 406 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 GON7Q9BXV9 100 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 CLEC2DQ9UHP7 191 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 MRPS28Q9Y2Q9 187 aaKnown RBP11.25□□□□□ -0.61
TPM1-223ENST00000560445 TGP01266 2768 aa11.25□□□□□ -0.61
TPM1-223ENST00000560445 SDCBPO00560 298 aaPredicted RBP11.24□□□□□ -0.61
TPM1-223ENST00000560445 HSD17B6O14756 317 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 GEMIN2O14893 280 aaKnown RBP11.24□□□□□ -0.61
TPM1-223ENST00000560445 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
TPM1-223ENST00000560445 UBBP0CG47 229 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 IGFBP3P17936 291 aaPredicted RBP11.24□□□□□ -0.61
TPM1-223ENST00000560445 SSTR5P35346 364 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 GDNFP39905 211 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 SLC35A2P78381 396 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 CD83Q01151 205 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 ZNF816Q0VGE8 651 aaPredicted RBP11.24□□□□□ -0.61
TPM1-223ENST00000560445 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 AWAT2Q6E213 333 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 ZNF554Q86TJ5 538 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 FOXRED2Q8IWF2 684 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 LINC00311Q8N616 119 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 BPIFB6Q8NFQ5 453 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 PLPPR1Q8TBJ4 325 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 ARL11Q969Q4 196 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 UQCC2Q9BRT2 126 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 CST11Q9H112 138 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 PLCXD1Q9NUJ7 323 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 NECAP2Q9NVZ3 263 aa11.24□□□□□ -0.61
TPM1-223ENST00000560445 NOTCH3Q9UM47 2321 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 PSMB11A5LHX3 300 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 ERICH4A6NGS2 130 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 G3V4G9 280 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
TPM1-223ENST00000560445 JUNBP17275 347 aaPredicted RBP11.23□□□□□ -0.61
TPM1-223ENST00000560445 CD24P25063 80 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 GNG10P50151 68 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 LTC4SQ16873 150 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 MS4A15Q8N5U1 240 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 OR8H1Q8NGG4 311 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 RFESDQ8TAC1 157 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 SGCDQ92629 289 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 DPF1Q92782 380 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 PGLYRP3Q96LB9 341 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 OR14A2Q96R54 314 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 MND1Q9BWT6 205 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 SCN3BQ9NY72 215 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 ZMAT5Q9UDW3 170 aaKnown RBP11.23□□□□□ -0.61
TPM1-223ENST00000560445 PSORS1C1Q9UIG5 152 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 TRAPPC2LQ9UL33 140 aa11.23□□□□□ -0.61
TPM1-223ENST00000560445 SIRT4Q9Y6E7 314 aaPredicted RBP11.23□□□□□ -0.61
TPM1-223ENST00000560445 TRBV5-7A0A0A0MS05 114 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 A0A1W2PPI3 338 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 GNAO1P09471 354 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 CELP19835 753 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 TMEM95Q3KNT9 176 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 STEAP3Q658P3 488 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 RAB12Q6IQ22 244 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 GLIPR1L1Q6UWM5 242 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 LYG1Q8N1E2 194 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 OR2T10Q8NGZ9 312 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 MUL1Q969V5 352 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
TPM1-223ENST00000560445 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
TPM1-223ENST00000560445 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 LRRC42Q9Y546 428 aa11.22□□□□□ -0.61
TPM1-223ENST00000560445 A0A1W2PRX2 142 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 SERPINE3A8MV23 424 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 PIN1P1O15428 100 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 RRP9O43818 475 aaKnown RBP11.21□□□□□ -0.61
TPM1-223ENST00000560445 RGS11O94810 467 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 LALBAP00709 142 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 IGKV1D-33P01593 117 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 IGKV1-33P01594 117 aa11.21□□□□□ -0.61
TPM1-223ENST00000560445 MT-ND4P03905 459 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms