RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 TMEM249Q2WGJ8 235 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SPIN4Q56A73 249 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 RBM48Q5RL73 367 aaKnown RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 C10orf91Q5T1B1 145 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 HES3Q5TGS1 186 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 NXNL2Q5VZ03 156 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 CYHR1Q6ZMK1 362 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TMPPEQ6ZT21 453 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SSX7Q7RTT5 188 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 FAM19A3Q7Z5A8 133 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 MTERF4Q7Z6M4 381 aaKnown RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 HS3ST5Q8IZT8 346 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 MUC15Q8N387 334 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 C17orf78Q8N4C9 275 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 EIF4E3Q8N5X7 224 aaKnown RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 ZFAND2AQ8N6M9 145 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TRIML2Q8N7C3 387 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR10P1Q8NGE3 313 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR10D4PQ8NGN7 298 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR9I1Q8NGQ6 314 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR11L1Q8NGX0 322 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR4A5Q8NH83 315 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ANGPTL6Q8NI99 470 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 CASTOR1Q8WTX7 329 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TWIST2Q8WVJ9 160 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 GTF2H4Q92759 462 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 CCDC124Q96CT7 223 aaKnown RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 SLC25A44Q96H78 314 aaPredicted RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 FAM210AQ96ND0 272 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SERPINB11Q96P15 392 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR8B2Q96RD0 313 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 LINC01587Q99440 93 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 APOL4Q9BPW4 351 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SIKE1Q9BRV8 207 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ANAPC13Q9BS18 74 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 FAAP24Q9BTP7 215 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 HIGD2AQ9BW72 106 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TSSK6Q9BXA6 273 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 BEX2Q9BXY8 128 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 PRRG3Q9BZD7 231 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ARL6Q9H0F7 186 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 OR51E2Q9H255 320 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ZNF286AQ9HBT8 521 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TMBIM4Q9HC24 238 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 IFT46Q9NQC8 304 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SLC23A2Q9UGH3 650 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ENPP5Q9UJA9 477 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 VPREB3Q9UKI3 123 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 MCTS1Q9ULC4 181 aaKnown RBP0.32□□□□□ -2.36
SPG11-222ENST00000560435 POMPQ9Y244 141 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SNX24Q9Y343 169 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 PHLDA3Q9Y5J5 127 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 VWA8A3KMH1 1905 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 ABCB11O95342 1321 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 VWDEQ8N2E2 1590 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 TMEM94Q12767 1356 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 KIAA0232Q92628 1395 aa0.32□□□□□ -2.36
SPG11-222ENST00000560435 SHANK3Q9BYB0 1731 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 TRAV8-2A0A0B4J237 113 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 GOLGA8QA0A0J9YX86 632 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 LOC102725191A0A1B0GVB3 256 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 TMEM213A2RRL7 107 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 GOLGA8IPA6NC78 632 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 A6NED7 52 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SDHAF1A6NFY7 115 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 IQCF5A8MTL0 148 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 ODF3BA8MYP8 253 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 F5H5K5 113 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 G3V3Q6 166 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 C3orf84H3BNL1 204 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 M0QX08 132 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 PHYHO14832 338 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CYTH3O43739 400 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 ENSAO43768 121 aaKnown RBP0.31□□□□□ -2.36
SPG11-222ENST00000560435 NEMFO60524 1076 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SCN2BO60939 215 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 GUSBP08236 651 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CTSGP08311 255 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR12D1P0DN82 309 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CTSEP14091 401 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SPNP16150 400 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 AKR1C4P17516 323 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 PRPS1L1P21108 318 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SYT1P21579 422 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 BLVRBP30043 206 aaPredicted RBP0.31□□□□□ -2.36
SPG11-222ENST00000560435 COILP38432 576 aaPredicted RBP0.31□□□□□ -2.36
SPG11-222ENST00000560435 MAGEA6P43360 314 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 STC1P52823 247 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 MP68P56378 58 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR2B6P58173 313 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 RAB8AP61006 207 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 RAB2AP61019 212 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 UBE2KP61086 200 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 GTF2BQ00403 316 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 PSG4Q00888 419 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 FOXF1Q12946 379 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 STX3Q13277 289 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SLAMF1Q13291 335 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SKP2Q13309 424 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SYCP1Q15431 976 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms