RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
TRAF3-208ENST00000560371 BGLAPP02818 100 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 ARG1P05089 322 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 PTPRDP23468 1912 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 OGG1O15527 345 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 PMELP40967 661 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 HOXA4Q00056 320 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-208ENST00000560371 PIGYQ3MUY2 71 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 LILRB1Q8NHL6 650 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-208ENST00000560371 UCP2P55851 309 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 GABRA6Q16445 453 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 HSD17B13Q7Z5P4 300 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-208ENST00000560371 AKIP1Q9NQ31 210 aa11.78□□□□□ -0.52
TRAF3-208ENST00000560371 APELAP0DMC3 54 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 OPN3Q9H1Y3 402 aaPredicted RBP11.77□□□□□ -0.52
TRAF3-208ENST00000560371 CHODLQ9H9P2 273 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 HS3ST3B1Q9Y662 390 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 CA11O75493 328 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 NQO2P16083 231 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 GNG4P50150 75 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 ERVFRD-1P60508 538 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 DMKNQ6E0U4 476 aaPredicted RBP11.77□□□□□ -0.52
TRAF3-208ENST00000560371 VWA1Q6PCB0 445 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 CHST5Q9GZS9 411 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 ZDHHC11Q9H8X9 412 aa11.77□□□□□ -0.52
TRAF3-208ENST00000560371 J3QR89 54 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 CST4P01036 141 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 CSF2RBP32927 897 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 ATP6V1FQ16864 119 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 FHL5Q5TD97 284 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 Q8WTZ3 238 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 WDR90Q96KV7 1748 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 GREB1LQ9C091 1923 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-208ENST00000560371 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
TRAF3-208ENST00000560371 AREGP15514 252 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 PSMB2P49721 201 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 MMDQ15546 238 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 DTD1Q8TEA8 209 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 IL13RA2Q14627 380 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 XAF1Q6GPH4 301 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 DLL1O00548 723 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 FAM181AQ8N9Y4 354 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 RNF133Q8WVZ7 376 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 ABHD1Q96SE0 405 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
TRAF3-208ENST00000560371 PPYP01298 95 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 RAB5AP20339 215 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 OR2V2Q96R30 315 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 SLC7A10Q9NS82 523 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 J3KRW8 73 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 TSPAN2O60636 221 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 GYPAP02724 150 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 TPPP2P59282 170 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 ECSCRQ19T08 205 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 WNT2BQ93097 391 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 SLC2A9Q9NRM0 540 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 CIDEAO60543 219 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 MMP16P51512 607 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 CSRP2Q16527 193 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 ZNF519Q8TB69 540 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 ANGPTL4Q9BY76 406 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 KCNK15Q9H427 330 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 SF3B6Q9Y3B4 125 aaKnown RBP11.76□□□□□ -0.53
TRAF3-208ENST00000560371 CD1BP29016 333 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 PRDX2P32119 198 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 RAB32Q13637 225 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 PCDHGA9Q9Y5G4 932 aaKnown RBP11.76□□□□□ -0.53
TRAF3-208ENST00000560371 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 NPIPB8E9PQR5 432 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 RPS4Y1P22090 263 aaKnown RBP11.76□□□□□ -0.53
TRAF3-208ENST00000560371 LOC285556D6RIA3 1793 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 OR4C45A6NMZ5 311 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 TRIM77I1YAP6 450 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 NGFRP08138 427 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 GZMKP49863 264 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 PILRAQ9UKJ1 303 aa11.76□□□□□ -0.53
TRAF3-208ENST00000560371 HSBP1O75506 76 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 IGKV1D-16P01601 117 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 SUMO1P63165 101 aaKnown RBP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 DHRS11Q6UWP2 260 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
TRAF3-208ENST00000560371 MUC6Q6W4X9 2439 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 CEACAM1P13688 526 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 RHOFQ9HBH0 211 aa11.75□□□□□ -0.53
TRAF3-208ENST00000560371 RAG2P55895 527 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms