RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 Q96M66 194 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 DUX5Q96PT3 197 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 SELENOIQ9C0D9 397 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 NCOR1P1Q9H4R4 102 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 BANF2Q9H503 90 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 HEXA-AS1Q9H8Q6 139 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 ING3Q9NXR8 418 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 RCC2Q9P258 522 aaKnown RBP7.63□□□□□ -1.19
LDLR-211ENST00000560173 COMMD3Q9UBI1 195 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 KIF25Q9UIL4 384 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 ETV7Q9Y603 341 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 SESN1Q9Y6P5 492 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 V9GY05 133 aa7.63□□□□□ -1.19
LDLR-211ENST00000560173 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 SHISA3A0PJX4 238 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 MEIOCA2RUB1 952 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A10PA6NDY2 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A18PA6NE21 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A16PA6NEW6 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A20PA6NIJ5 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A8PA6NJQ4 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A7PA6NKC0 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A22PA8MWA6 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A12PA8MX19 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A5PA8MXJ8 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A23PA8MXZ1 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 ODF3BA8MYP8 253 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM25AB3EWG3 89 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM25CB3EWG5 89 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM25GB3EWG6 89 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 AIPO00170 330 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 SLC17A2O00624 439 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 HOXA3O43365 443 aaPredicted RBP7.62□□□□□ -1.19
LDLR-211ENST00000560173 MMP23AO75900 390 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 PTTG1O95997 202 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 RNASE1P07998 156 aaKnown RBP7.62□□□□□ -1.19
LDLR-211ENST00000560173 FBP1P09467 338 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A15PP0C7V4 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A13PP0C7W8 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A14PP0C7W9 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM90A24PP0C7X0 464 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 CFPP27918 469 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 HTR2CP28335 458 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 QRFPP83859 136 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 UNC119Q13432 240 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 PRAMEF5Q5TYX0 476 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 LAX1Q8IWV1 398 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 TMEM86BQ8N661 226 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 OR13D1Q8NGV5 346 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 C17orf50Q8WW18 174 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM46BQ96A09 425 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 SLC25A28Q96A46 364 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 PPP1R14BQ96C90 147 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 AJUBAQ96IF1 538 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 CST11Q9H112 138 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 GAL3ST2Q9H3Q3 398 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 KCNK15Q9H427 330 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 SPACA1Q9HBV2 294 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 ABCB10Q9NRK6 738 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 TAS2R3Q9NYW6 316 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 OR6C3Q9NZP0 311 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 DAPK2Q9UIK4 370 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 SPATA2Q9UM82 520 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 FAM96BQ9Y3D0 163 aa7.62□□□□□ -1.19
LDLR-211ENST00000560173 AK6Q9Y3D8 172 aaKnown RBP7.62□□□□□ -1.19
LDLR-211ENST00000560173 MEIKINA0A087WXM9 373 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 ZNF729A6NN14 1252 aaPredicted RBP7.61□□□□□ -1.19
LDLR-211ENST00000560173 IFITM5A6NNB3 132 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 TMEM14DPA8MWL7 114 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 BPNT1O95861 308 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 MPIG6BO95866 241 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 CGB3P0DN86 165 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 CGB7P0DN87 165 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 CDK2P24941 298 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 GDNFP39905 211 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 GLP1RP43220 463 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 INPP1P49441 399 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 RPS27AP62979 156 aaKnown RBP7.61□□□□□ -1.19
LDLR-211ENST00000560173 P2RY14Q15391 338 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 RAB11BQ15907 218 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 C17orf58Q2M2W7 97 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 PYDC2Q56P42 97 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 ATAD3CQ5T2N8 411 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 TRIQKQ629K1 86 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 ZNF626Q68DY1 528 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 SIGIRRQ6IA17 410 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 SLC35E4Q6ICL7 350 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 OR10K2Q6IF99 312 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 RAB12Q6IQ22 244 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 CNIH2Q6PI25 160 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 BRICD5Q6PL45 260 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 HEPN1Q6WQI6 88 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 Q6ZNX1 250 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 OR11H6Q8NGC7 330 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 OR13A1Q8NGR1 328 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 SSMEM1Q8WWF3 244 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 TMEM59Q9BXS4 323 aa7.61□□□□□ -1.19
LDLR-211ENST00000560173 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms