RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 IFNA1P01562 189 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 MRGPRGQ86SM5 289 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 RTN4IP1Q8WWV3 396 aaPredicted RBP16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 TMEM234Q8WY98 164 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 CTHRC1Q96CG8 243 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 SOHLH2Q9NX45 425 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 PROB1E7EW31 1015 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 FAHP16930 419 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 TSPOP30536 169 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 ARF6P62330 175 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 FFAR4Q5NUL3 377 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 OR5D18Q8NGL1 313 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 OR52N5Q8NH56 324 aa16.57■□□□□ 0.24
SEMA4B-215ENST00000560089 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 SSSCA1O60232 199 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 SRSF10O75494 262 aaKnown RBP16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 AADACP22760 399 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 OR4A47Q6IF82 309 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 FAM180AQ6UWF9 173 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 FGF22Q9HCT0 170 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 FBXL7Q9UJT9 491 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 TP53TG3Q9ULZ0 132 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 DUXBA0A1W2PPF3 345 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 PSMF1Q92530 271 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 PARLQ9H300 379 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 MMP25Q9NPA2 562 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 PHPT1Q9NRX4 125 aaPredicted RBP16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 RPRMQ9NS64 109 aa16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 MRPS16Q9Y3D3 137 aaKnown RBP16.56■□□□□ 0.24
SEMA4B-215ENST00000560089 SLC16A7O60669 478 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 PIAS2O75928 621 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 CEACAM5P06731 702 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 NSDHLQ15738 373 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 RAB42Q8N4Z0 105 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 TSACCQ96A04 125 aaPredicted RBP16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 ATP5SQ99766 215 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 APOOQ9BUR5 198 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 C11orf1Q9H5F2 150 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 IGKV1D-8A0A087WSZ0 117 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 IGHV1-69-2A0A0G2JMI3 117 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 OR6C6A6NF89 314 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 TIAF1O95411 115 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 HLA-HP01893 362 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 OR3A4PP47883 348 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 LINC00310P59036 64 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 NIT1Q86X76 327 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 LRTM2Q8N967 370 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 OR2M7Q8NG81 312 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 OR5D14Q8NGL3 314 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 FAM103A1Q9BTL3 118 aaKnown RBP16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 FAM166BA8MTA8 275 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 NKX2-1P43699 371 aaPredicted RBP16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 MLF1P58340 268 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 TLE1Q04724 770 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF542PQ5EBM4 170 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 KLHDC1Q8N7A1 406 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 CCL4L1Q8NHW4 92 aa16.55■□□□□ 0.24
SEMA4B-215ENST00000560089 ASAH2BP0C7U1 165 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 SLC6A8P48029 635 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 PHLDA2Q53GA4 152 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 OR10A2Q9H208 303 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF586Q9NXT0 402 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 RNF114Q9Y508 228 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 CSTAP01040 98 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 GYPAP02724 150 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 PPP1CBP62140 327 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF154Q13106 437 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 Q8N976 141 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 OR4N2Q8NGD1 307 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 OR51T1Q8NGJ9 327 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 BMFQ96LC9 184 aa16.54■□□□□ 0.24
SEMA4B-215ENST00000560089 CORTO00230 105 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 MSTNO14793 375 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 ESDP10768 282 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 CD226Q15762 336 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 TCF23Q7RTU1 214 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 SIGLECL1Q8N7X8 197 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 FAM131CQ96AQ9 280 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 ZDHHC11Q9H8X9 412 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 C11orf98E9PRG8 122 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF737O75373 536 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 IGKV1D-16P01601 117 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF728P0DKX0 622 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 DUSP3P51452 185 aaPredicted RBP16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 ZNF726P1Q15940 193 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 C1orf147Q96MC9 270 aaPredicted RBP16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 RBM24Q9BX46 236 aaKnown RBP16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 CDC42EP3Q9UKI2 254 aa16.53■□□□□ 0.24
SEMA4B-215ENST00000560089 SH2D1BO14796 132 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 GABRA2P47869 451 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 MEX3BQ6ZN04 569 aaKnown RBP16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 BAGE3Q86Y29 109 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 BAGE2Q86Y30 109 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 TCTEX1D1Q8N7M0 179 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 MBD3L1Q8WWY6 194 aa16.52■□□□□ 0.24
SEMA4B-215ENST00000560089 MSI2Q96DH6 328 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms