RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CCDC107Q8WV48 283 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 OR8B2Q96RD0 313 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 THAP7Q9BT49 309 aaPredicted RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 RIMS4Q9H426 269 aaPredicted RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 SCPEP1Q9HB40 452 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 MMP26Q9NRE1 261 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 CLN8Q9UBY8 286 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 RPUSD1Q9UJJ7 312 aaKnown RBP7.72□□□□□ -1.17
HERC1-206ENST00000559996 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
HERC1-206ENST00000559996 MEIKINA0A087WXM9 373 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 NPIPB11E5RHQ5 1161 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 PLA2G10O15496 165 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 FCER2P06734 321 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 LPLP06858 475 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 SCTP09683 121 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 GSTT2P0CG29 244 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 GSTT2BP0CG30 244 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 EDDM3BP56851 147 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 GNG2P59768 71 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.18
HERC1-206ENST00000559996 MRPS10P82664 201 aaKnown RBP7.71□□□□□ -1.18
HERC1-206ENST00000559996 MEF2CQ06413 473 aaPredicted RBP7.71□□□□□ -1.18
HERC1-206ENST00000559996 ARFRP1Q13795 201 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 EDDM3AQ14507 147 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 C11orf91Q3C1V1 193 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 PYDC2Q56P42 97 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 RNASE12Q5GAN4 147 aaKnown RBP7.71□□□□□ -1.18
HERC1-206ENST00000559996 OR52W1Q6IF63 320 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 GDPD3Q7L5L3 318 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 Q8N402 240 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 Q8N7P7 452 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 MRGPRDQ8TDS7 321 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 NEK7Q8TDX7 302 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
HERC1-206ENST00000559996 C12orf4Q9NQ89 552 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 LINC00312Q9Y6C7 94 aa7.71□□□□□ -1.18
HERC1-206ENST00000559996 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 KIR2DS1A0A191URI9 304 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 ANKRD20A5PA0PJZ0 165 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 C17orf98A8MV24 154 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 TRDCB7Z8K6 153 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 C12orf77C9JDV5 145 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 RBBP9O75884 186 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 CD74P04233 296 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 HEXAP06865 529 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 ZNF735P0CB33 412 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 IL7P13232 177 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 CCL3L1P16619 93 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 GZMHP20718 246 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 SSTR5P35346 364 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 LOXL3P58215 753 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 GNB2P62879 340 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 LCN2P80188 198 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 SSBP1Q04837 148 aaKnown RBP7.7□□□□□ -1.18
HERC1-206ENST00000559996 KLF9Q13886 244 aaPredicted RBP7.7□□□□□ -1.18
HERC1-206ENST00000559996 ZNF846Q147U1 533 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 IGSF11Q5DX21 431 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 LDLRAD3Q86YD5 345 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 OR4D10Q8NGI6 311 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 OR1L1Q8NH94 360 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 FCAMRQ8WWV6 532 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 DMRTB1Q96MA1 342 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 WDR12Q9GZL7 423 aaKnown RBP7.7□□□□□ -1.18
HERC1-206ENST00000559996 TOLLIPQ9H0E2 274 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 TAF9BQ9HBM6 251 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 TAS2R3Q9NYW6 316 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 OPN4Q9UHM6 478 aa7.7□□□□□ -1.18
HERC1-206ENST00000559996 MAP1AP78559 2803 aaPredicted RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 TRBV23-1A0A0A0MS06 115 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 PPIAL4CA0A0B4J2A2 164 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 KBTBD11-OT1A0A1B0GTJ5 212 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 hADV38S2A0JD32 116 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 H7C1Q1 480 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 F2RL2O00254 374 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 ECDO95905 644 aaPredicted RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 HBZP02008 142 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 CD3DP04234 171 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 PPIAL4GP0DN37 164 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 IGHV4-31P0DP07 118 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 MMP9P14780 707 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 CBX5P45973 191 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 DLX1P56177 255 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 PAX8Q06710 450 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 ESCO2Q56NI9 601 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 ZNF660Q6AZW8 331 aaPredicted RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 HCP5Q6MZN7 132 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 OVCH2Q7RTZ1 564 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 ZNF554Q86TJ5 538 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 TMEM229BQ8NBD8 167 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 BEST4Q8NFU0 473 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 UBALD1Q8TB05 177 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 H1FXQ92522 213 aaKnown RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 TNFRSF14Q92956 283 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms