RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 C5orf24Q7Z6I8 188 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 FGFRL1Q8N441 504 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 BARX1Q9HBU1 254 aaPredicted RBP10.11□□□□□ -0.79
HERC1-205ENST00000559886 COPZ2Q9P299 210 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 NDUFB7P17568 137 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 ATP5J2P56134 94 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 IGSF11Q5DX21 431 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 ZNF554Q86TJ5 538 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 SPICQ8N5J4 248 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 OR4A4PQ8NGN8 299 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 OR13A1Q8NGR1 328 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 LURAP1Q96LR2 239 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 PRRT1Q99946 306 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 KCNIP1Q9NZI2 227 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 SCP2D1Q9UJQ7 156 aa10.11□□□□□ -0.79
HERC1-205ENST00000559886 ANKRD17O75179 2603 aaKnown RBP10.11□□□□□ -0.79
HERC1-205ENST00000559886 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 ABCA12Q86UK0 2595 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 TCRBP04435 133 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 CTXN2P0C2S0 81 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 OR5H8P0DN80 308 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 PDLIM4P50479 330 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 HERPUD1Q15011 391 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 TRAT1Q6PIZ9 186 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 ZNF841Q6ZN19 808 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 ZNF565Q8N9K5 539 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 MRGPRDQ8TDS7 321 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 GSX2Q9BZM3 304 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 OR6C3Q9NZP0 311 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 IGKV1-6A0A0C4DH72 117 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 C12orf77C9JDV5 145 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 WNT2P09544 360 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 RPS2P15880 293 aaKnown RBP10.1□□□□□ -0.79
HERC1-205ENST00000559886 GZMHP20718 246 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 SEC61A1P61619 476 aaKnown RBP10.1□□□□□ -0.79
HERC1-205ENST00000559886 TSPAN5P62079 268 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 ZNF660Q6AZW8 331 aaPredicted RBP10.1□□□□□ -0.79
HERC1-205ENST00000559886 PLET1Q6UQ28 207 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 DHRS11Q6UWP2 260 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 Q6ZNX1 250 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 IDO2Q6ZQW0 420 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 CABLES2Q9BTV7 478 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 MMP28Q9H239 520 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 OPN4Q9UHM6 478 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 PCDHB10Q9UN67 800 aa10.1□□□□□ -0.79
HERC1-205ENST00000559886 YLPM1P49750 1951 aaKnown RBP10.1□□□□□ -0.79
HERC1-205ENST00000559886 NBPF19A0A087WUL8 3843 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 NDUFB6O95139 128 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 DIRAS3O95661 229 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 GLP1RP43220 463 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 MEF2CQ06413 473 aaPredicted RBP10.09□□□□□ -0.79
HERC1-205ENST00000559886 RBMS2Q15434 407 aaKnown RBP10.09□□□□□ -0.79
HERC1-205ENST00000559886 SCGB2B2Q4G0G5 96 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 BTN2A1Q7KYR7 527 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 NLRC3Q7RTR2 1065 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 LHFPL1Q86WI0 220 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 OR13C8Q8NGS7 320 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 TERB2Q8NHR7 220 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 CORO2AQ92828 525 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 NEIL1Q96FI4 390 aaPredicted RBP10.09□□□□□ -0.79
HERC1-205ENST00000559886 KIRREL1Q96J84 757 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 APCP25054 2843 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 TRBV6-7A0A0A0MS04 114 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 C15orf65H3BRN8 121 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 CGB3P0DN86 165 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 CGB7P0DN87 165 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 OR8B3Q8NGG8 313 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 OR6F1Q8NGZ6 308 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 UPRTQ96BW1 309 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 PERPQ96FX8 193 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 OR8B2Q96RD0 313 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 SLC25A21Q9BQT8 299 aaPredicted RBP10.09□□□□□ -0.79
HERC1-205ENST00000559886 PATZ1Q9HBE1 687 aaKnown RBP10.09□□□□□ -0.79
HERC1-205ENST00000559886 NUDT15Q9NV35 164 aa10.09□□□□□ -0.79
HERC1-205ENST00000559886 POLQO75417 2590 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 TRGV10A0A0A0MS01 117 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 MEX3AA1L020 520 aaKnown RBP10.08□□□□□ -0.8
HERC1-205ENST00000559886 NPIPB11E5RHQ5 1161 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 F5H0A9 414 aaPredicted RBP10.08□□□□□ -0.8
HERC1-205ENST00000559886 BET1O15155 118 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 GPR37O15354 613 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 HBZP02008 142 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 SSTR5P35346 364 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 RPL31P62899 125 aaKnown RBP10.08□□□□□ -0.8
HERC1-205ENST00000559886 TCF23Q7RTU1 214 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 GIMAP1Q8WWP7 306 aa10.08□□□□□ -0.8
HERC1-205ENST00000559886 IL1F10Q8WWZ1 152 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms