RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 COL10A1Q03692 680 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 IL24Q13007 206 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ASAH1Q13510 395 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 UBE2V2Q15819 145 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CCDC58Q4VC31 144 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 UTF1Q5T230 341 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ZNF684Q5T5D7 378 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 C11orf87Q6NUJ2 197 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 KCTD18Q6PI47 426 aaPredicted RBP4.63□□□□□ -1.67
USP3-215ENST00000559771 C10orf99Q6UWK7 81 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 SSX6Q7RTT6 188 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 RNF144BQ7Z419 303 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 KCTD20Q7Z5Y7 419 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CADM3Q8N126 398 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 SYS1Q8N2H4 156 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 LILRB2Q8N423 598 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 TPRX1Q8N7U7 411 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 OR52N4Q8NGI2 321 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ITFG2Q969R8 447 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 R3HDM4Q96D70 268 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CMTM3Q96MX0 182 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 MNTQ99583 582 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 SOSTQ9BQB4 213 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 BARHL1Q9BZE3 327 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 PKIBQ9C010 78 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 SRRQ9GZT4 340 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ADGRL4Q9HBW9 690 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 OR14J1Q9UGF5 321 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 MRM2Q9UI43 246 aaKnown RBP4.63□□□□□ -1.67
USP3-215ENST00000559771 SLC22A13Q9Y226 551 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 TBL2Q9Y4P3 447 aaKnown RBP4.63□□□□□ -1.67
USP3-215ENST00000559771 V9GYH0 126 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 IGHV2-26A0A0B4J1V2 119 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 TRAV1-2A0A0B4J238 106 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 A0A1W2PQL4 384 aaPredicted RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 WI2-2373I1.2A0A1W2PRP0 233 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 DAPL1A0PJW8 107 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 CTDSP2O14595 271 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 GATBO75879 557 aaKnown RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 NXPH2O95156 264 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 ZNF728P0DKX0 622 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 CELP19835 753 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 CD24P25063 80 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 TGFBR1P36897 503 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 RIDAP52758 137 aaKnown RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 LGALS4P56470 323 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 RPS7P62081 194 aaKnown RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 FABP5Q01469 135 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 CLVS2Q5SYC1 327 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 C22orf42Q6IC83 251 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 MZT2BQ6NZ67 158 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 AKAP14Q86UN6 197 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 COMMD2Q86X83 199 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 ZNF573Q86YE8 665 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 OR4P4Q8NGL7 312 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 TRMT10AQ8TBZ6 339 aaKnown RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 RPS4Y2Q8TD47 263 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 ASB17Q8WXJ9 295 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 THRSPQ92748 146 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 FOXRED1Q96CU9 486 aaPredicted RBP4.62□□□□□ -1.67
USP3-215ENST00000559771 DIRAS2Q96HU8 199 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 ALG8Q9BVK2 526 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 PRSS22Q9GZN4 317 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 OR52A1Q9UKL2 312 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 POLDIP2Q9Y2S7 368 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 HILPDAQ9Y5L2 63 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 R4GMQ9 66 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 TENM3Q9P273 2699 aa4.62□□□□□ -1.67
USP3-215ENST00000559771 IGKV1-9A0A0C4DH69 117 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 A0A1W2PPH5 198 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 FAM230AA0A1W2PPH8 454 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 SH2D7A6NKC9 451 aaPredicted RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 DHRS7CA6NNS2 312 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 LY6LH3BQJ8 138 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 H3BSH0 61 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 GABRPO00591 440 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 OGG1O15527 345 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 SC5DO75845 299 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 ARL6IP5O75915 188 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 MPIG6BO95866 241 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 IGLV1-47P01700 117 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 CHRM2P08172 466 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 CALCBP10092 127 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 IL7P13232 177 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 MYL9P24844 172 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 TALDO1P37837 337 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 NPBWR2P48146 333 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 EIF2B2P49770 351 aaKnown RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 GBX2P52951 348 aaPredicted RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 SLURP1P55000 103 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 EDDM3BP56851 147 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 RPS25P62851 125 aaKnown RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 SRSF3P84103 164 aaKnown RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
USP3-215ENST00000559771 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 BCL2L15Q5TBC7 163 aa4.61□□□□□ -1.67
USP3-215ENST00000559771 MINOS1Q5TGZ0 78 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms