RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 DNAJB11Q9UBS4 358 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 HSPB11Q9Y547 144 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TEX13DA0A0J9YY54 714 aaPredicted RBP10.63□□□□□ -0.71
USP3-213ENST00000559711 M0R233 179 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TFF1P04155 84 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TNFRSF1AP19438 455 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 APOBEC3AP31941 199 aaPredicted RBP10.63□□□□□ -0.71
USP3-213ENST00000559711 TLE1Q04724 770 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 AESQ08117 197 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TESK1Q15569 626 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 EFNB3Q15768 340 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 LGALSLQ3ZCW2 172 aaPredicted RBP10.63□□□□□ -0.71
USP3-213ENST00000559711 FAM185AQ8N0U4 392 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 OR11L1Q8NGX0 322 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 ANGPTL6Q8NI99 470 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 KIRREL1Q96J84 757 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 SNX22Q96L94 193 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 NAA60Q9H7X0 242 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 TAF9BQ9HBM6 251 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 KIF25Q9UIL4 384 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 PPP1R3CQ9UQK1 317 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 KCNIP3Q9Y2W7 256 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
USP3-213ENST00000559711 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 TUBAL3A6NHL2 446 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 CCSO14618 274 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 RGS13O14921 159 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 SIAH2O43255 324 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 HEXAP06865 529 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 RND3P61587 244 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 MST1LQ2TV78 715 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 LDLRAD3Q86YD5 345 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
USP3-213ENST00000559711 BOLLQ8N9W6 283 aaKnown RBP10.62□□□□□ -0.71
USP3-213ENST00000559711 CCDC71LQ8N9Z2 235 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 GALNT11Q8NCW6 608 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 PPP1R35Q8TAP8 253 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 NEUROG1Q92886 237 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 KCNIP1Q9NZI2 227 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
USP3-213ENST00000559711 IGHV3OR15-7A0A075B7D8 119 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 OOEPA6NGQ2 149 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 B9A039 149 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 K7N7A8 449 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
USP3-213ENST00000559711 CCL8P80075 99 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 FGL1Q08830 312 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 TMEM187Q14656 261 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 KRBOX4Q5JUW0 171 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 GSG1LQ6UXU4 331 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 SDSLQ96GA7 329 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 SEC22AQ96IW7 307 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 LURAP1Q96LR2 239 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 TMEM204Q9BSN7 226 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 SUCNR1Q9BXA5 334 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 EGLN1Q9GZT9 426 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 SLC5A7Q9GZV3 580 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 TOLLIPQ9H0E2 274 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 MS4A5Q9H3V2 200 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 SLA2Q9H6Q3 261 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 PRR13Q9NZ81 148 aa10.61□□□□□ -0.71
USP3-213ENST00000559711 ANKHD1Q8IWZ3 2542 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 DEFB108AA8MXU0 73 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 C12orf77C9JDV5 145 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 GPR31O00270 319 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 MGST3O14880 152 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 MPPED1O15442 326 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 ADAP1O75689 374 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 CYB5R3P00387 301 aaPredicted RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 PLAUP00749 431 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 MUC1P15941 1255 aaPredicted RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 AGAP20933 346 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 CD80P33681 288 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 GABRA2P47869 451 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 GLIPR1P48060 266 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 SNRPD2P62316 118 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 CYCSP99999 105 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 FAM201AQ5SY85 155 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 C6orf183Q5T699 404 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 STUMQ69YW2 141 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 ZNF818PQ6ZRF7 136 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 ZNF565Q8N9K5 539 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 IL1F10Q8WWZ1 152 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 VRK1Q99986 396 aaPredicted RBP10.6□□□□□ -0.71
USP3-213ENST00000559711 NMES1Q9C002 83 aa10.6□□□□□ -0.71
USP3-213ENST00000559711 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms