RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NUBP2Q9Y5Y2 271 aa14.39□□□□□ -0.11
CHRNA3-206ENST00000559658 C12orf77C9JDV5 145 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 MGST3O14880 152 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 IGHV4-39P01824 125 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 IFNA6P05013 189 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 GLP1RP43220 463 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 TSPAN5P62079 268 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 TATDN3Q17R31 274 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 ATPAF1Q5TC12 328 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 LHFPL1Q86WI0 220 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 CADM3Q8N126 398 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 OR1L1Q8NH94 360 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 IL1F10Q8WWZ1 152 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 ZNF2Q9BSG1 426 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 PARP12Q9H0J9 701 aaKnown RBP14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 NARFLQ9H6Q4 476 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 ODAMA1E959 279 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 NKX6-3A6NJ46 265 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 H2AFB2P0C5Z0 115 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 PI3P19957 117 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 P2RX3P56373 397 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 HMGN3Q15651 99 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 LDLRAD3Q86YD5 345 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 ZNF525Q8N782 197 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 MARCH1Q8TCQ1 289 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 TAF9BQ9HBM6 251 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 NECAP2Q9NVZ3 263 aa14.38□□□□□ -0.11
CHRNA3-206ENST00000559658 CEACAM18A8MTB9 384 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 PPIHO43447 177 aaKnown RBP14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 F12P00748 615 aaPredicted RBP14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 VSIG10L2P0DP72 767 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 KCNJ3P48549 501 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 UTF1Q5T230 341 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 ARRDC1Q8N5I2 433 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 PRRT1Q99946 306 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 FXYD6Q9H0Q3 95 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 DLL4Q9NR61 685 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 SCP2D1Q9UJQ7 156 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 ALG5Q9Y673 324 aa14.37□□□□□ -0.11
CHRNA3-206ENST00000559658 NDUFB7P17568 137 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 FCGR2CP31995 323 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 PAX5Q02548 391 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 GNMTQ14749 295 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 SRSF7Q16629 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 RFESDQ8TAC1 157 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 GIMAP1Q8WWP7 306 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 PSMG3-AS1Q96PY0 264 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 MYOZ1Q9NP98 299 aaPredicted RBP14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 COPZ2Q9P299 210 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 SLC25A10Q9UBX3 287 aaPredicted RBP14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 FBXO9Q9UK97 447 aaPredicted RBP14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 CSMD1Q96PZ7 3565 aa14.36□□□□□ -0.11
CHRNA3-206ENST00000559658 KIR2DS1A0A191URI9 304 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 FUOMA2VDF0 154 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 DVL1O14640 695 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 RLN1P04808 185 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 AADACP22760 399 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 KIR2DS4P43632 304 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 EFNA4P52798 201 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 FXYD4P59646 89 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 KIR2DS1Q14954 304 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 MOB1BQ7L9L4 216 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 TMED4Q7Z7H5 227 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 TERB2Q8NHR7 220 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 SEC22CQ9BRL7 303 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 CABLES2Q9BTV7 478 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 ZNF221Q9UK13 617 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 APCP25054 2843 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 MAP1AP78559 2803 aaPredicted RBP14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 ARID1AO14497 2285 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 C15orf65H3BRN8 121 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 H7C1Q1 480 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 OMGP23515 440 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 ERVFRD-1P60508 538 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 MRPS11P82912 194 aaKnown RBP14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 TMEM17Q86X19 198 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 ADAD2Q8NCV1 583 aaKnown RBP14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 OR52B4Q8NGK2 314 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 SLC23A1Q9UHI7 598 aa14.35□□□□□ -0.11
CHRNA3-206ENST00000559658 IGHV3-43A0A0B4J1X8 118 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 IGKV1D-13A0A0B4J2D9 117 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 PEX14O75381 377 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 HBZP02008 142 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 IGHV3-43DP0DP04 118 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 IGKV1-13P0DP09 117 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 ZNF273Q14593 569 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 LTC4SQ16873 150 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 OR4A4PQ8NGN8 299 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 PPP1R35Q8TAP8 253 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 TOMM40LQ969M1 308 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 FAM234AQ9H0X4 552 aa14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 ANKRD17O75179 2603 aaKnown RBP14.34□□□□□ -0.11
CHRNA3-206ENST00000559658 TRBV6-7A0A0A0MS04 114 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 A0A0A6YYJ9 748 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 BCAP31P51572 246 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms