RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ZNF83P51522 516 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ZNHIT3Q15649 155 aaPredicted RBP1.23□□□□□ -2.21
VPS13C-207ENST00000558919 GOLGA7BQ2TAP0 167 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 CEACAM21Q3KPI0 293 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 LAMTOR1Q6IAA8 161 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 Q6ZQT7 251 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 DPPA2Q7Z7J5 298 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 CPNE9Q8IYJ1 553 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ZFP82Q8N141 532 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 FAM45AQ8TCE6 357 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 DYNC2LI1Q8TCX1 351 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 CASTOR1Q8WTX7 329 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 C2orf15Q8WU43 125 aaKnown RBP1.23□□□□□ -2.21
VPS13C-207ENST00000558919 FXYD5Q96DB9 178 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 OLFM3Q96PB7 478 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ANAPC13Q9BS18 74 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 DRC3Q9H069 523 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 SLC25A31Q9H0C2 315 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 RHOFQ9HBH0 211 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ASCL3Q9NQ33 180 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 TAS2R13Q9NYV9 303 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 UBAP1Q9NZ09 502 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 FBXL3Q9UKT7 428 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ICOSQ9Y6W8 199 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 ATRNO75882 1429 aa1.23□□□□□ -2.21
VPS13C-207ENST00000558919 POLR3AO14802 1390 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 IGHV2-26A0A0B4J1V2 119 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 GOLGA6L10A6NI86 522 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF729A6NN14 1252 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 A8MWP4 228 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 I3L4J1 428 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 LIN7AO14910 233 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TOX3O15405 576 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TCF21O43680 179 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF73O43830 326 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 MPZL2O60487 215 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 PDCD6O75340 191 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 RAB36O95755 333 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 CA2P00918 260 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 IGHMP01871 453 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TRGV3P03979 118 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 LIMS3P0CW19 117 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 LIMS4P0CW20 117 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 GTF2F2P13984 249 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 CBR1P16152 277 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 ATF1P18846 271 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TSPOP30536 169 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 RAB25P57735 213 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 OR10A3P58181 314 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 C1QTNF8P60827 252 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 RAB8AP61006 207 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 HBG1P69891 147 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 HBG2P69892 147 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 CCDC122Q5T0U0 273 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 NIPAL1Q6NVV3 410 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 Q6ZS52 159 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 FUNDC1Q8IVP5 155 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 SLC25A45Q8N413 288 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 LFNGQ8NES3 379 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 BPIFB6Q8NFQ5 453 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TWIST2Q8WVJ9 160 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 MRAP2Q96G30 205 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 PGLYRP3Q96LB9 341 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM56Q96MV1 263 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 HBEGFQ99075 208 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 TAPBPLQ9BX59 468 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 ZNF436Q9C0F3 470 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 MFSD1Q9H3U5 465 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 COMMD9Q9P000 198 aa1.22□□□□□ -2.21
VPS13C-207ENST00000558919 V9GYY5 206 aaPredicted RBP1.22□□□□□ -2.21
VPS13C-207ENST00000558919 VWDEQ8N2E2 1590 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 IGHV1-45A0A0A0MS14 117 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 TRAV8-2A0A0B4J237 113 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 FAM183AA6NL82 134 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 EFCAB9A8MZ26 197 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 C9J4A7 227 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM250H0YL14 139 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 H3BP45 60 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 KLRC4-KLRK1H3BQV0 150 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 OVOL1O14753 267 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 PSCAO43653 123 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CYTH3O43739 400 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 UGT2B11O75310 529 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CRTAPO75718 401 aaPredicted RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 POP7O75817 140 aaKnown RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 PDYNP01213 254 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 IGKV1D-33P01593 117 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 IGKV1-33P01594 117 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 ORM1P02763 201 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 IGKV5-2P06315 115 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CGB3P0DN86 165 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CGB7P0DN87 165 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 AKR1C4P17516 323 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 PRPS1L1P21108 318 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 F8A1P23610 371 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CBX5P45973 191 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 STC1P52823 247 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 EMP2P54851 167 aa1.21□□□□□ -2.22
VPS13C-207ENST00000558919 PRDX1Q06830 199 aaKnown RBP1.21□□□□□ -2.22
VPS13C-207ENST00000558919 CASP8Q14790 479 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms