RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SLC33A1O00400 549 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-206ENST00000558739 IGKV1D-12P01611 117 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 GAPDHP04406 335 aaKnown RBP8.94□□□□□ -0.98
SMAD3-206ENST00000558739 CDC42P60953 191 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 FLOT2Q14254 428 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 GALEQ14376 348 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 MMDQ15546 238 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 LRRC36Q1X8D7 754 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 ODF4Q2M2E3 257 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 SPIN3Q5JUX0 258 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 Q6P435 159 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 LYG2Q86SG7 212 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 OR2T33Q8NG76 320 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 OR9G4Q8NGQ1 327 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 MRGPRDQ8TDS7 321 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 GIPC3Q8TF64 312 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 MS4A10Q96PG2 267 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 FEVQ99581 238 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 NEURL2Q9BR09 285 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 COPS3Q9UNS2 423 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 A3GALT2U3KPV4 340 aa8.94□□□□□ -0.98
SMAD3-206ENST00000558739 FUOMA2VDF0 154 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 SLC31A2O15432 143 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 FKBP6O75344 327 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 TPPPO94811 219 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 IFNGP01579 166 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 CSN2P05814 226 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 MRPL3P09001 348 aaKnown RBP8.93□□□□□ -0.98
SMAD3-206ENST00000558739 ZNF44P15621 663 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 HTR1FP30939 366 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 Q8IYB0 196 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 YIPF7Q8N8F6 280 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 PHLDA1Q8WV24 401 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-206ENST00000558739 RFT1Q96AA3 541 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
SMAD3-206ENST00000558739 LINC00574Q9H8X3 128 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 HMG20AQ9NP66 347 aa8.93□□□□□ -0.98
SMAD3-206ENST00000558739 MEIKINA0A087WXM9 373 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 MSGN1A6NI15 193 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 NPIPB11E5RHQ5 1161 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 SH2D1BO14796 132 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 ATP5HO75947 161 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 HLA-DRB1P01911 266 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 CSN3P07498 182 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 CD1BP29016 333 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 VHLP40337 213 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 SYNJ2BPP57105 145 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 DYRK1AQ13627 763 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 ZNF829Q3KNS6 432 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-206ENST00000558739 BCL2L15Q5TBC7 163 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 SPATA24Q86W54 205 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 OR8H1Q8NGG4 311 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 NRBF2Q96F24 287 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 ANKRD60Q9BZ19 345 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 ETAA1Q9NY74 926 aa8.92□□□□□ -0.98
SMAD3-206ENST00000558739 FOXA2Q9Y261 457 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-206ENST00000558739 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 LOC110117498-PIK3R3F6TDL0 507 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 ANXA8P13928 327 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 FASP25445 335 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 RASSF2P50749 326 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 TPPP2P59282 170 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 CDK5Q00535 292 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 DEFA5Q01523 94 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 TNFRSF9Q07011 255 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 RAB40BQ12829 278 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
SMAD3-206ENST00000558739 Q6ZSR3 168 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 ELMOD2Q8IZ81 293 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 HS3ST5Q8IZT8 346 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 Q8N402 240 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 OR51T1Q8NGJ9 327 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 UTP4Q969X6 686 aaKnown RBP8.91□□□□□ -0.98
SMAD3-206ENST00000558739 BORCS8Q96FH0 119 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 CHST5Q9GZS9 411 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 SLC25A19Q9HC21 320 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 CHCHD3Q9NX63 227 aaKnown RBP8.91□□□□□ -0.98
SMAD3-206ENST00000558739 SELENOKQ9Y6D0 94 aa8.91□□□□□ -0.98
SMAD3-206ENST00000558739 IGHV3-43A0A0B4J1X8 118 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 IGKV1-9A0A0C4DH69 117 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 PRSS29PA6NIE9 313 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 GNGT2O14610 69 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 RTL8CO15255 209 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 XRCC3O43542 346 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 TRBV12-3P01733 135 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 IGHV3-43DP0DP04 118 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 EGR2P11161 476 aaPredicted RBP8.9□□□□□ -0.98
SMAD3-206ENST00000558739 OSMP13725 252 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 CCL1P22362 96 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 PRKACGP22612 351 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 FUT6P51993 359 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 ROM1Q03395 351 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 CDK5R1Q15078 307 aa8.9□□□□□ -0.98
SMAD3-206ENST00000558739 CD300EQ496F6 205 aaPredicted RBP8.9□□□□□ -0.98
SMAD3-206ENST00000558739 OR5D18Q8NGL1 313 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms