RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, human

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRTC3-206	ENST00000558619	RPL22L1	Q6P5R6	122 aa	Known RBP	13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	ASCL4	Q6XD76	172 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	C18orf65	Q6ZTR6	163 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	LINC00596	Q86U02	117 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	STPG2	Q8N412	459 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	OR52N1	Q8NH53	320 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	IFT22	Q9H7X7	185 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	MRPS18A	Q9NVS2	196 aa	Known RBP	13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	IL36G	Q9NZH8	169 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF581	Q9P0T4	197 aa		13.58	□□□□□ -0.24
CRTC3-206	ENST00000558619	IGHV3-72	A0A0B4J1Y9	119 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	TMEM30CP	A0ZSE6	113 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	NCBP2L	A6PVI3	153 aa	Known RBP	13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	SDCBP	O00560	298 aa	Predicted RBP	13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	GEMIN2	O14893	280 aa	Known RBP	13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	LIMS3	P0CW19	117 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	LIMS4	P0CW20	117 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	GZMH	P20718	246 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	MYCNOS	P40205	109 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	CCDC58	Q4VC31	144 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	NHLRC3	Q5JS37	347 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	ATAD3C	Q5T2N8	411 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	XAF1	Q6GPH4	301 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	NEK7	Q8TDX7	302 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	APH1B	Q8WW43	257 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	ARL11	Q969Q4	196 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	TMEM138	Q9NPI0	162 aa		13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.57	□□□□□ -0.24
CRTC3-206	ENST00000558619	COL7A1	Q02388	2944 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	IL3RA	P26951	378 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	MPV17L	Q2QL34	196 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	UNQ9370/PRO34162	Q6UXP9	181 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	TMPRSS11A	Q6ZMR5	421 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	TGIF2LX	Q8IUE1	241 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	C10orf67	Q8IYJ2	551 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	IZUMO1	Q8IYV9	350 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	UBALD1	Q8TB05	177 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	CCDC107	Q8WV48	283 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	EAF1	Q96JC9	268 aa	Predicted RBP	13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	SLC29A1	Q99808	456 aa		13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	FGF20	Q9NP95	211 aa	Predicted RBP	13.56	□□□□□ -0.24
CRTC3-206	ENST00000558619	IGHV3-43	A0A0B4J1X8	118 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	C15orf65	H3BRN8	121 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	AP4M1	O00189	453 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF780A	O75290	641 aa	Predicted RBP	13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	IGHV3-43D	P0DP04	118 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	BDKRB2	P30411	391 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	RAB25	P57735	213 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	DCTN2	Q13561	401 aa	Known RBP	13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	EBI3	Q14213	229 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	OR2G6	Q5TZ20	316 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	TEX38	Q6PEX7	206 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF695	Q8IW36	515 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	OR52M1	Q8NGK5	317 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	OR2T10	Q8NGZ9	312 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	P2RX4	Q99571	388 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	GON7	Q9BXV9	100 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	LIN7C	Q9NUP9	197 aa	Known RBP	13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZMAT5	Q9UDW3	170 aa	Known RBP	13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	DNAH9	Q9NYC9	4486 aa		13.55	□□□□□ -0.24
CRTC3-206	ENST00000558619	AIP	O00170	330 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	GPR12	P47775	334 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	ETV1	P50549	477 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	RIPK1	Q13546	671 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	SMN1	Q16637	294 aa	Known RBP	13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	STX19	Q8N4C7	294 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	LINC00311	Q8N616	119 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF555	Q8NEP9	628 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	ORAI1	Q96D31	301 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	SMIM19	Q96E16	107 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	DUX3	Q96PT4	197 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF184	Q99676	751 aa	Predicted RBP	13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	B9D2	Q9BPU9	175 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	ABCG5	Q9H222	651 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619	GFOD1	Q9NXC2	390 aa		13.54	□□□□□ -0.24
CRTC3-206	ENST00000558619		A0A1W2PP11	408 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	LINC01548	A6NM66	108 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	RRP9	O43818	475 aa	Known RBP	13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	ORC5	O43913	435 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	GTF2F2	P13984	249 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	DCK	P27707	260 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	PNLIPRP3	Q17RR3	467 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	SLC22A6	Q4U2R8	563 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	ZNF497	Q6ZNH5	498 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619		Q8N6K4	173 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	C8orf31	Q8N9H6	132 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619		Q8N9W7	124 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	OR13C5	Q8NGS8	318 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	RASL11B	Q9BPW5	248 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	CKLF	Q9UBR5	152 aa		13.53	□□□□□ -0.24
CRTC3-206	ENST00000558619	IRGM	A1A4Y4	181 aa		13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619		H0YHG0	523 aa		13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	TXNL1	O43396	289 aa		13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	WBP4	O75554	376 aa	Known RBP	13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	MOS	P00540	346 aa		13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	RPLP1	P05386	114 aa	Known RBP	13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	MYL12A	P19105	171 aa		13.52	□□□□□ -0.25
CRTC3-206	ENST00000558619	CD1B	P29016	333 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms