RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 RBP4P02753 201 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 IGHV1-8P0DP01 117 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 HIST1H1DP16402 221 aaKnown RBP14.27□□□□□ -0.12
TPM1-214ENST00000558544 GNB3P16520 340 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 EPHA1P21709 976 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 OMGP23515 440 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 SSTR5P35346 364 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 SAMD12Q8N8I0 201 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 HDHD3Q9BSH5 251 aaPredicted RBP14.27□□□□□ -0.12
TPM1-214ENST00000558544 ZMAT3Q9HA38 289 aaKnown RBP14.27□□□□□ -0.12
TPM1-214ENST00000558544 CHMP1AQ9HD42 196 aaPredicted RBP14.27□□□□□ -0.12
TPM1-214ENST00000558544 COMMD3Q9UBI1 195 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 TRAPPC2LQ9UL33 140 aa14.27□□□□□ -0.12
TPM1-214ENST00000558544 NF1P21359 2839 aa14.27□□□□□ -0.13
TPM1-214ENST00000558544 KBTBD11-OT1A0A1B0GTJ5 212 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 A0A1W2PRD5 423 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 A0A1W2PRF3 423 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 A0A1W2PRM7 423 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 MFNGO00587 321 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 FAM157CP0CG43 387 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 CGB3P0DN86 165 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 CGB7P0DN87 165 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 COX7A1P24310 79 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 CDK2P24941 298 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 GDNFP39905 211 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 NCR3LG1Q68D85 454 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 UBALD1Q8TB05 177 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 C22orf15Q8WYQ4 148 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 KCNK7Q9Y2U2 307 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 SESN1Q9Y6P5 492 aa14.26□□□□□ -0.13
TPM1-214ENST00000558544 IGHV1-69DA0A0B4J2H0 117 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 FAM172BPA6NC97 362 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 SCGNO76038 276 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 IGHV1-69P01742 117 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 RCC1P18754 421 aaPredicted RBP14.25□□□□□ -0.13
TPM1-214ENST00000558544 SOX6P35712 828 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 LSAMPQ13449 338 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 LTC4SQ16873 150 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 C6orf183Q5T699 404 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 BAIAP2L2Q6UXY1 529 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 PNKDQ8N490 385 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 RFESDQ8TAC1 157 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 SETD6Q8TBK2 473 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 ACOT12Q8WYK0 555 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 AP3S1Q92572 193 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 PHF21AQ96BD5 680 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 TSC22D3Q99576 134 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 CMSS1Q9BQ75 279 aaKnown RBP14.25□□□□□ -0.13
TPM1-214ENST00000558544 ZNF69Q9UC07 566 aa14.25□□□□□ -0.13
TPM1-214ENST00000558544 SOX21Q9Y651 276 aaPredicted RBP14.25□□□□□ -0.13
TPM1-214ENST00000558544 C12orf77C9JDV5 145 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 C15orf65H3BRN8 121 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 NAPSAO96009 420 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 GUCA2AQ02747 115 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 Q6ZPA2 131 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 BCL6BQ8N143 479 aaPredicted RBP14.24□□□□□ -0.13
TPM1-214ENST00000558544 ARL11Q969Q4 196 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 SUCNR1Q9BXA5 334 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 MS4A7Q9GZW8 240 aaPredicted RBP14.24□□□□□ -0.13
TPM1-214ENST00000558544 ABCG5Q9H222 651 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 HEXA-AS1Q9H8Q6 139 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 MBNL3Q9NUK0 354 aaKnown RBP14.24□□□□□ -0.13
TPM1-214ENST00000558544 IDI2-AS1Q9NZ38 188 aa14.24□□□□□ -0.13
TPM1-214ENST00000558544 CCDC59Q9P031 241 aaKnown RBP14.24□□□□□ -0.13
TPM1-214ENST00000558544 ELF5Q9UKW6 265 aaPredicted RBP14.24□□□□□ -0.13
TPM1-214ENST00000558544 NPIPB11E5RHQ5 1161 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 ORC5O43913 435 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 EIF4EP06730 217 aaKnown RBP14.23□□□□□ -0.13
TPM1-214ENST00000558544 CD3GP09693 182 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 GZMHP20718 246 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 NFYBP25208 207 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 UBE2E1P51965 193 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 MRPS15P82914 257 aaKnown RBP14.23□□□□□ -0.13
TPM1-214ENST00000558544 DYNC1I2Q13409 638 aaKnown RBP14.23□□□□□ -0.13
TPM1-214ENST00000558544 CDNFQ49AH0 187 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 C5orf24Q7Z6I8 188 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 PRR18Q8N4B5 295 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 OR13D1Q8NGV5 346 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 KIRREL1Q96J84 757 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 TMEM133Q9H2Q1 129 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 C12orf4Q9NQ89 552 aa14.23□□□□□ -0.13
TPM1-214ENST00000558544 TRAV18A0A075B6X5 111 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 TMEM235A6NFC5 223 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 SERPINE3A8MV23 424 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 HPGDSO60760 199 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 SCGB2A2Q13296 93 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 ARFRP1Q13795 201 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 OR52W1Q6IF63 320 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 MZT2AQ6P582 158 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 ZNF880Q6PDB4 577 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 TRAT1Q6PIZ9 186 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 IZUMO1Q8IYV9 350 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 DTX3Q8N9I9 347 aa14.22□□□□□ -0.13
TPM1-214ENST00000558544 S100A16Q96FQ6 103 aaKnown RBP14.22□□□□□ -0.13
TPM1-214ENST00000558544 SLC6A7Q99884 636 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms