RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 VHLLQ6RSH7 139 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 LINC01465Q8N7H1 131 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 AGBL5Q8NDL9 886 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 ZNF785A8K8V0 405 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 LINC00869P0C866 280 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 TMIGD3P0DMS9 266 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 TWIST1Q15672 202 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 MESTQ5EB52 335 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 TEPPQ6URK8 271 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 IP6K3Q96PC2 410 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 KLRC4-KLRK1H3BQV0 150 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 C1QL1O75973 258 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 IBA57Q5T440 356 aaKnown RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 OR8I2Q8N0Y5 310 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 CDCA3Q99618 268 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 CYR61O00622 381 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 NUDT3O95989 172 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 NPY1RP25929 384 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 PPP1CCP36873 323 aaKnown RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 RPL30P62888 115 aaKnown RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 FOXF1Q12946 379 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 RABEPKQ7Z6M1 372 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 HIST1H4GQ99525 98 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 SEBOXQ9HB31 216 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 SF3B6Q9Y3B4 125 aaKnown RBP10.35□□□□□ -0.75
CSPG4P12-201ENST00000558282 K7ESM1 405 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 CA11O75493 328 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 CTLA4P16410 223 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 CDAP32320 146 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 MPLP40238 635 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 CYB561P49447 251 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 FOXB1Q99853 325 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 DSPPQ9NZW4 1301 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 S1PR2O95136 353 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 ZNF519Q8TB69 540 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 SMIM8Q96KF7 97 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 QTRT1Q9BXR0 403 aaKnown RBP10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 IL4P05112 153 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 B4GALT1P15291 398 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 SRIP30626 198 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 RUNX1Q01196 453 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 VSTM2AQ8TAG5 236 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 R3HDM4Q96D70 268 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 NINQ8N4C6 2090 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 G3V3Y1 287 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 GABRG3Q99928 467 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 FGF22Q9HCT0 170 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 SIRT4Q9Y6E7 314 aaPredicted RBP10.34□□□□□ -0.75
CSPG4P12-201ENST00000558282 TRBV5-5A0A0J9YX44 114 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 STARD6P59095 220 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 EIF3IQ13347 325 aaKnown RBP10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 OR4D11Q8NGI4 311 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 SLC37A2Q8TED4 501 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 SLC25A38Q96DW6 304 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 COA4Q9NYJ1 87 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 ACTL6AO96019 429 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 C10orf126Q8N4M7 172 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 TPSD1Q9BZJ3 242 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 PLPP3O14495 311 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 ZP1P60852 638 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 TMEM178AQ8NBL3 297 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 OR8B12Q8NGG6 310 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 NEUROG1Q92886 237 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 WBP2Q969T9 261 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 WDYHV1Q96HA8 205 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 CCL28Q9NRJ3 127 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 CD207Q9UJ71 328 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 ARID1AO14497 2285 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 A0A1W2PPC1 479 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 MYBPHQ13203 477 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 ZNF793Q6ZN11 406 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 LSM10Q969L4 123 aaKnown RBP10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 CXCL16Q9H2A7 254 aa10.33□□□□□ -0.76
CSPG4P12-201ENST00000558282 RBP4P02753 201 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 ZNF260Q3ZCT1 412 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 PPIL1Q9Y3C6 166 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 MEX3AA1L020 520 aaKnown RBP10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 LSM6P62312 80 aaKnown RBP10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 LINC00596Q86U02 117 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
CSPG4P12-201ENST00000558282 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms