RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 LOXP28300 417 aaPredicted RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 RPA3P35244 121 aaPredicted RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 HRH1P35367 487 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CD200P41217 278 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PTGDSP41222 190 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CXCL5P42830 114 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CDKN2DP55273 166 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 TCTAP57738 103 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 OR12D2P58182 307 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PPP1CBP62140 327 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 IFITM2Q01629 132 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SLC25A11Q02978 314 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF616Q08AN1 781 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ECH1Q13011 328 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 GRK1Q15835 563 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PRSS8Q16651 343 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CEACAM21Q3KPI0 293 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SLC25A35Q3KQZ1 300 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PYCR3Q53H96 274 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CLEC12AQ5QGZ9 265 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 HIST2H3PS2Q5TEC6 136 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SMARCD3Q6STE5 483 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 WDR82Q6UXN9 313 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF620Q6ZNG0 422 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SLC16A13Q7RTY0 426 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CBLN2Q8IUK8 224 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF695Q8IW36 515 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 UBALD2Q8IYN6 164 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF567Q8N184 647 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 MUC15Q8N387 334 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 GATD1Q8NB37 220 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 OR4K17Q8NGC6 315 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 OR4P4Q8NGL7 312 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 OR5J2Q8NH18 312 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SKA2Q8WVK7 121 aaPredicted RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 DCPSQ96C86 337 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 PPCDCQ96CD2 204 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 DDIT4LQ96D03 193 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PDXPQ96GD0 296 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 C14orf144Q96I85 54 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 BTF3L4Q96K17 158 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PGLYRP3Q96LB9 341 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SORT1Q99523 831 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 CMSS1Q9BQ75 279 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 GINS3Q9BRX5 216 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 MND1Q9BWT6 205 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 MS4A8Q9BY19 250 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 DCSTAMPQ9H295 470 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 RPF2Q9H7B2 306 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 REEP1Q9H902 201 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 NMNAT1Q9HAN9 279 aaPredicted RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 TPT1P8Q9HAU6 139 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 EXOSC4Q9NPD3 245 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 RASL12Q9NYN1 266 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF226Q9NYT6 803 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 DOK5Q9P104 306 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 MMP17Q9ULZ9 603 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 ZNF835Q9Y2P0 537 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.89□□□□□ -2.11
SPG11-206ENST00000558093 LSM5Q9Y4Y9 91 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 RBM7Q9Y580 266 aaKnown RBP1.89□□□□□ -2.11
SPG11-206ENST00000558093 ADAMTSL1Q8N6G6 1762 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 RB1CC1Q8TDY2 1594 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 OTOFQ9HC10 1997 aa1.89□□□□□ -2.11
SPG11-206ENST00000558093 DOCK5Q9H7D0 1870 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 AKAP12Q02952 1782 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 A0A0G2JLM5 398 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 FAM240AA0A1B0GVK7 77 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 A0A1W2PRG6 482 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RBMY1BA6NDE4 496 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 RBMY1EA6NEQ0 496 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 LYRM9A8MSI8 78 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 FAM25AB3EWG3 89 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 FAM25CB3EWG5 89 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 FAM25GB3EWG6 89 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 F5H5K5 113 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 F6UB75 175 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 G3V2T6 193 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 ANGPTL7O43827 346 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR7C1O76099 320 aaPredicted RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 IGF2P01344 180 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 IGKV1-17P01599 117 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 C1QCP02747 245 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 IFNA4P05014 189 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 ARG1P05089 322 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 REG1AP05451 166 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 IGKV5-2P06315 115 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RBMY1DP0C7P1 496 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 RBMY1A1P0DJD3 496 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 CYBAP13498 195 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 HIST1H1TP22492 207 aaPredicted RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 IL12AP29459 219 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SDC4P31431 198 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 PHBP35232 272 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 LGALS7P47929 136 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 PSMD8P48556 350 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SERPINB10P48595 397 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 UBE2AP49459 152 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms