RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 STX19Q8N4C7 294 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 C5orf56Q8N8D9 126 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 OR51D1Q8NGF3 324 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 CYGBQ8WWM9 190 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 ZNF184Q99676 751 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-235ENST00000557740 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
SHMT2-235ENST00000557740 BABAM2Q9NXR7 383 aa11.61□□□□□ -0.55
SHMT2-235ENST00000557740 DIMT1Q9UNQ2 313 aaKnown RBP11.61□□□□□ -0.55
SHMT2-235ENST00000557740 SERPINE3A8MV23 424 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 AIPO00170 330 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 CCRL2O00421 344 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 SDCBPO00560 298 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-235ENST00000557740 MPIG6BO95866 241 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 GTF2F2P13984 249 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 IL3RAP26951 378 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 ZNF816Q0VGE8 651 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-235ENST00000557740 MPV17LQ2QL34 196 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 SLC35E3Q7Z769 313 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 MOB3BQ86TA1 216 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 ZNF329Q86UD4 541 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 ARL11Q969Q4 196 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 ORAI1Q96D31 301 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-235ENST00000557740 GPR61Q9BZJ8 451 aa11.6□□□□□ -0.55
SHMT2-235ENST00000557740 SIRT4Q9Y6E7 314 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-235ENST00000557740 TRBV5-5A0A0J9YX44 114 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 NUDT19A8MXV4 375 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 EBAG9O00559 213 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 OGG1O15527 345 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
SHMT2-235ENST00000557740 REG1BP48304 166 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 RPL23AP62750 156 aaKnown RBP11.59□□□□□ -0.55
SHMT2-235ENST00000557740 SLC35B1P78383 322 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 GPR176Q14439 515 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 Q499Y3 187 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 YIF1BQ5BJH7 314 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 FOXRED2Q8IWF2 684 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 JAGN1Q8N5M9 183 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 SETD9Q8NE22 299 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 UBALD1Q8TB05 177 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 CCDC107Q8WV48 283 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 DPF1Q92782 380 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 GHSRQ92847 366 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 SPACA1Q9HBV2 294 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 RAB9BQ9NP90 201 aa11.59□□□□□ -0.55
SHMT2-235ENST00000557740 IGHV3-72A0A0B4J1Y9 119 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 MAGEA13PA6NCF6 341 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
SHMT2-235ENST00000557740 ORC5O43913 435 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 LALBAP00709 142 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 IGFBP3P17936 291 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-235ENST00000557740 FSTP19883 344 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 TAS2R43P59537 309 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 TTC23Q5W5X9 447 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 DMKNQ6E0U4 476 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-235ENST00000557740 ZNF497Q6ZNH5 498 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 OR2W3Q7Z3T1 314 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 IZUMO1Q8IYV9 350 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 LINC00482Q8N8I6 264 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 ZFP41Q8N8Y5 198 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 TMEM80Q96HE8 168 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 CLEC2DQ9UHP7 191 aa11.58□□□□□ -0.56
SHMT2-235ENST00000557740 MRPS28Q9Y2Q9 187 aaKnown RBP11.58□□□□□ -0.56
SHMT2-235ENST00000557740 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 IGHV3-43A0A0B4J1X8 118 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 A0A1W2PP11 408 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 C15orf65H3BRN8 121 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 SPINT2O43291 252 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 IGHG2P01859 326 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 IGHV3-43DP0DP04 118 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 LRRC36Q1X8D7 754 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 MRPL41Q8IXM3 137 aaKnown RBP11.57□□□□□ -0.56
SHMT2-235ENST00000557740 LINC00311Q8N616 119 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 COMMD1Q8N668 190 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 C8orf31Q8N9H6 132 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 MUL1Q969V5 352 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 ETAA1Q9NY74 926 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 TRAPPC2LQ9UL33 140 aa11.57□□□□□ -0.56
SHMT2-235ENST00000557740 PNMA8CA0A1B0GUJ8 204 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 MCRIP1C9JLW8 97 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 K7EIL1 84 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 GPX5O75715 221 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 MT-ND4P03905 459 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 SLC6A1P30531 599 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 ST3GAL4Q11206 333 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 EBI3Q14213 229 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 Q3ZCU0 254 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 C6orf183Q5T699 404 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 AWAT2Q6E213 333 aa11.56□□□□□ -0.56
SHMT2-235ENST00000557740 GLIPR1L1Q6UWM5 242 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms