RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DIRAS3O95661 229 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 NAPSAO96009 420 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 FBP1P09467 338 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 CDK2P24941 298 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 GLP1RP43220 463 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 VEGFCP49767 419 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 RORCP51449 518 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 PRRX1P54821 245 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 TMEM50BP56557 158 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 HILS1P60008 231 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 MRPS15P82914 257 aaKnown RBP11.18□□□□□ -0.62
SHMT2-234ENST00000557703 PITPNAQ00169 270 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHMT2-234ENST00000557703 GPR107Q5VW38 600 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF626Q68DY1 528 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 C8orf31Q8N9H6 132 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 AP3S1Q92572 193 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 MALSU1Q96EH3 234 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 NICN1Q9BSH3 213 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 CLEC7AQ9BXN2 247 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 RNF167Q9H6Y7 350 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 POMT1Q9Y6A1 747 aa11.18□□□□□ -0.62
SHMT2-234ENST00000557703 F2RL2O00254 374 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 SOCS1O15524 211 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 NOL3O60936 208 aaKnown RBP11.17□□□□□ -0.62
SHMT2-234ENST00000557703 SLC2A2P11168 524 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-234ENST00000557703 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 NKAPLQ5M9Q1 402 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 IDNKQ5T6J7 187 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 HCP5Q6MZN7 132 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 LDLRAD3Q86YD5 345 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 BEND2Q8NDZ0 799 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 SULT4A1Q9BR01 284 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 ATG5Q9H1Y0 275 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 ABCG5Q9H222 651 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 DIABLOQ9NR28 239 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 RHBDL2Q9NX52 303 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 IDI2-AS1Q9NZ38 188 aa11.17□□□□□ -0.62
SHMT2-234ENST00000557703 A0A0A6YYD4 124 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 IGHV2-26A0A0B4J1V2 119 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ODF3BA8MYP8 253 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 C15orf65H3BRN8 121 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 PAHP00439 452 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 GSTP1P09211 210 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 HIST1H1DP16402 221 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 SOX6P35712 828 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 CEACAM3P40198 252 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 SERPINB10P48595 397 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ARHGDIBP52566 201 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 RPL15P61313 204 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 VBP1P61758 197 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 NCS1P62166 190 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 HTD2P86397 168 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 PNLIPRP3Q17RR3 467 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF880Q6PDB4 577 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 BRICD5Q6PL45 260 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 Q6YL49 198 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ABHD12Q8N2K0 398 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 MRGPRDQ8TDS7 321 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 SSMEM1Q8WWF3 244 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ARL11Q969Q4 196 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 KIRREL1Q96J84 757 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 PECRQ9BY49 303 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 DPAGT1Q9H3H5 408 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 GHITMQ9H3K2 345 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
SHMT2-234ENST00000557703 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-234ENST00000557703 MEIOCA2RUB1 952 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 TRIM77I1YAP6 450 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-234ENST00000557703 TOR1AO14656 332 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 RGS11O94810 467 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 TPPPO94811 219 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 CD3GP09693 182 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 CLEC2LP0C7M8 214 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 SAA4P35542 130 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 BRD3OSQ6XYD6 125 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 Q6ZS49 121 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 PNKDQ8N490 385 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
SHMT2-234ENST00000557703 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 FAM216AQ8WUB2 273 aa11.15□□□□□ -0.62
SHMT2-234ENST00000557703 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms