RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 MARS2Q96GW9 593 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 KIRREL1Q96J84 757 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 SULT4A1Q9BR01 284 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 FAAP24Q9BTP7 215 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 OR51B6Q9H340 312 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 UFSP2Q9NUQ7 469 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 ELOVL5Q9NYP7 299 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CACFD1Q9UGQ2 172 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 GPR132Q9UNW8 380 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 C14orf166Q9Y224 244 aaKnown RBP10.79□□□□□ -0.68
SHMT2-229ENST00000557348 TMED3Q9Y3Q3 217 aa10.79□□□□□ -0.68
SHMT2-229ENST00000557348 CHD8Q9HCK8 2581 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 IGHV2OR16-5A0A0B4J2B6 119 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 A0A1W2PR80 420 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 GLI4P10075 376 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 MUC1P15941 1255 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-229ENST00000557348 Q3ZCU0 254 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 MYPOPQ86VE0 399 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-229ENST00000557348 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 C2orf50Q96LR7 162 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 RNF126Q9BV68 326 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-229ENST00000557348 MTCH1Q9NZJ7 389 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 OSGIN2Q9Y236 505 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
SHMT2-229ENST00000557348 DOCK7Q96N67 2140 aa10.77□□□□□ -0.68
SHMT2-229ENST00000557348 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 KIR2DS1A0A191URI9 304 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 C5orf51A6NDU8 294 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 ZNHIT1O43257 154 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 CTXN2P0C2S0 81 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 RAB5AP20339 215 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
SHMT2-229ENST00000557348 KIR2DS4P43632 304 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 NPBWR2P48146 333 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 FABP9Q0Z7S8 132 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 PSG7Q13046 419 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 KIR2DS1Q14954 304 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 SPIN3Q5JUX0 258 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 ZNF474Q6S9Z5 364 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-229ENST00000557348 Q8NA96 180 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 NAXEQ8NCW5 288 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 MARCH1Q8TCQ1 289 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 TMED6Q8WW62 240 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 C14orf79Q96F83 325 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 FAM212BQ9NTI7 297 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-229ENST00000557348 DECR2Q9NUI1 292 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
SHMT2-229ENST00000557348 CEP295Q9C0D2 2601 aa10.77□□□□□ -0.69
SHMT2-229ENST00000557348 TRBV6-6A0A0A6YYG2 114 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 A8MXE2 369 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 FAM157AC9JC47 383 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 AGFG2O95081 481 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SFT2D2O95562 160 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 CRYAAP02489 173 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 OR5H8P0DN80 308 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 DHRS11Q6UWP2 260 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 RTN4RL2Q86UN3 420 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 CISD2Q8N5K1 135 aaKnown RBP10.76□□□□□ -0.69
SHMT2-229ENST00000557348 OR13G1Q8NGZ3 307 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 C2CD4CQ8TF44 421 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SLC5A7Q9GZV3 580 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 TOLLIPQ9H0E2 274 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 PLEKHA2Q9HB19 425 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 LUZP4Q9P127 313 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 MAP1BP46821 2468 aaKnown RBP10.76□□□□□ -0.69
SHMT2-229ENST00000557348 A0A1B0GWJ7 208 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SYNGR1O43759 233 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 TIMM8AO60220 97 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SEC11BP0C7V7 166 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 VAMP1P23763 118 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 SERPINF1P36955 418 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 LRRC37A5PQ49AS3 106 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 AADACL3Q5VUY0 350 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 MOB1BQ7L9L4 216 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 UBAC2Q8NBM4 344 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 OR13D1Q8NGV5 346 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 TAF9BQ9HBM6 251 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 CRIM1Q9NZV1 1036 aa10.76□□□□□ -0.69
SHMT2-229ENST00000557348 CTSDP07339 412 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-229ENST00000557348 HOXB5P09067 269 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 PGA5P0DJD9 388 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 AKR1C4P17516 323 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 HOXA5P20719 270 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 CDX1P47902 265 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-229ENST00000557348 NPY4RP50391 375 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 CASP6P55212 293 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 UCP3P55916 312 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 DEFA6Q01524 100 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 IL15RAQ13261 267 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 SLC16A13Q7RTY0 426 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 SCCPDHQ8NBX0 429 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 NEK7Q8TDX7 302 aa10.75□□□□□ -0.69
SHMT2-229ENST00000557348 S100PBPQ96BU1 408 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms