RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 C9orf66Q5T8R8 295 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 SLC35E3Q7Z769 313 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 TGIF2LXQ8IUE1 241 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 STPG2Q8N412 459 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 DRAM1Q8N682 238 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 C8orf31Q8N9H6 132 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 KLHL30-AS1Q8NEE0 82 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 Q8NFD4 153 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 PXT1Q8NFP0 134 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 OR5D14Q8NGL3 314 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 OR8U1Q8NH10 309 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 OR56B4Q8NH76 319 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 EME1Q96AY2 570 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 MRPL48Q96GC5 212 aaKnown RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 NOL4LQ96MY1 436 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 CHCHD6Q9BRQ6 235 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 GABARAPL3Q9BY60 117 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CHCHD3Q9NX63 227 aaKnown RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 CALYQ9NYX4 217 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 PSG11Q9UQ72 335 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 MYRFQ9Y2G1 1151 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 RYR2Q92736 4967 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 FAM172BPA6NC97 362 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 J3QRE1 110 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 SLC16A6O15403 523 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 MPZL2O60487 215 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 GAPDHP04406 335 aaKnown RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 HTR1AP08908 422 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 CCDC159P0C7I6 412 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 CALCBP10092 127 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 FCGR1AP12314 374 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 FASP25445 335 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 CHATP28329 748 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 INSL3P51460 131 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 ZP1P60852 638 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 MRPL28Q13084 256 aaKnown RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 FOXE3Q13461 319 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 HES1Q14469 280 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 ATXN7L3Q14CW9 347 aaPredicted RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 KISS1Q15726 138 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 Q3ZCU0 254 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 TP53I3Q53FA7 332 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 CXorf66Q5JRM2 361 aaPredicted RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 SERPINA12Q8IW75 414 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 IZUMO1Q8IYV9 350 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 PARP16Q8N5Y8 322 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 LINC00311Q8N616 119 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 OR8H1Q8NGG4 311 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 OR52M1Q8NGK5 317 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 OR13C3Q8NGS6 347 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 RAX2Q96IS3 184 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 JAM3Q9BX67 310 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 ABCG5Q9H222 651 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 PPIL3Q9H2H8 161 aaKnown RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 RIBC2Q9H4K1 309 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 DCLRE1BQ9H816 532 aa6.8□□□□□ -1.32
VRK1-206ENST00000557222 LIN7CQ9NUP9 197 aaKnown RBP6.8□□□□□ -1.32
VRK1-206ENST00000557222 LYSTQ99698 3801 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 MEIKINA0A087WXM9 373 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 TRAV24A0A0B4J272 114 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 SNTNA6NMZ2 147 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 OR4C45A6NMZ5 311 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 H0YJX3 145 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 SULT1B1O43704 296 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 RRP9O43818 475 aaKnown RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 IGKV1D-33P01593 117 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 IGKV1-33P01594 117 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 TMEM225BP0DP42 221 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 CD1BP29016 333 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 GLP1RP43220 463 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 GPR12P47775 334 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 NANOS3P60323 173 aaKnown RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 GPR50Q13585 617 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 ALKBH1Q13686 389 aaKnown RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 PAN3Q58A45 887 aaKnown RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 ZNF691Q5VV52 312 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 RSBN1Q5VWQ0 802 aaPredicted RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 MEDAGQ5VYS4 303 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 TEPPQ6URK8 271 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 ASCL4Q6XD76 172 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 C18orf65Q6ZTR6 163 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 Q8N6K4 173 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 ACBD7Q8N6N7 88 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 OR13A1Q8NGR1 328 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 OR13C9Q8NGT0 318 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 OR10X1Q8NGY0 326 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 OR2T10Q8NGZ9 312 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 CNIH3Q8TBE1 160 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 TFAP2CQ92754 450 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 RFT1Q96AA3 541 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 SLC7A6OSQ96CW6 309 aaPredicted RBP6.79□□□□□ -1.32
VRK1-206ENST00000557222 CIB1Q99828 191 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 KIF25Q9UIL4 384 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 AP4S1Q9Y587 144 aa6.79□□□□□ -1.32
VRK1-206ENST00000557222 IGHV1-3A0A0C4DH29 117 aa6.78□□□□□ -1.32
VRK1-206ENST00000557222 DAPL1A0PJW8 107 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms