RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 BPIFB3P59826 476 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 PLAC9Q5JTB6 97 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 UTF1Q5T230 341 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 CLVS1Q8IUQ0 354 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-225ENST00000556798 GAPTQ8N292 157 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 RFESDQ8TAC1 157 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 MRPL30Q8TCC3 161 aaKnown RBP14.25□□□□□ -0.13
SHMT2-225ENST00000556798 ZNF418Q8TF45 676 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-225ENST00000556798 PECRQ9BY49 303 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 ATG5Q9H1Y0 275 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 TMEM133Q9H2Q1 129 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 AK3Q9UIJ7 227 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 SCOCQ9UIL1 159 aa14.25□□□□□ -0.13
SHMT2-225ENST00000556798 TCF21O43680 179 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 NFYBP25208 207 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 RPL5P46777 297 aaKnown RBP14.24□□□□□ -0.13
SHMT2-225ENST00000556798 TUSC1Q2TAM9 212 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 OLFML2AQ68BL7 652 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 Q6ZTK2 550 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 OR13D1Q8NGV5 346 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 C17orf50Q8WW18 174 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 PTX4Q96A99 478 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 KIRREL1Q96J84 757 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 HDHD3Q9BSH5 251 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-225ENST00000556798 IDI2-AS1Q9NZ38 188 aa14.24□□□□□ -0.13
SHMT2-225ENST00000556798 A0A075B6Q4 140 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 IGHV2-26A0A0B4J1V2 119 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 C12orf77C9JDV5 145 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 C15orf65H3BRN8 121 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 RAB27BO00194 218 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 CA11O75493 328 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 VENTXO95231 258 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 ARG1P05089 322 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 RCC1P18754 421 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-225ENST00000556798 PAX6P26367 422 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 DYNC1I2Q13409 638 aaKnown RBP14.23□□□□□ -0.13
SHMT2-225ENST00000556798 RBMS3Q6XE24 437 aaKnown RBP14.23□□□□□ -0.13
SHMT2-225ENST00000556798 Q6ZPA2 131 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 C5orf24Q7Z6I8 188 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 OR10R2Q8NGX6 335 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 ARL11Q969Q4 196 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 ZDHHC16Q969W1 377 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 SLC25A46Q96AG3 418 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 RAB3CQ96E17 227 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 DUX5Q96PT3 197 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 CLEC7AQ9BXN2 247 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 ZNF286AQ9HBT8 521 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 CHMP1AQ9HD42 196 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-225ENST00000556798 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 HSF4Q9ULV5 492 aa14.23□□□□□ -0.13
SHMT2-225ENST00000556798 METTL21EPA6NDL7 271 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 ODF3BA8MYP8 253 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 NPIPB11E5RHQ5 1161 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 IGHV3-7P01780 117 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 GNB3P16520 340 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 HILS1P60008 231 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 MIDNQ504T8 468 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 C6orf183Q5T699 404 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 ZNF626Q68DY1 528 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 LHFPL4Q7Z7J7 247 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 CROCCP3Q8IVE0 287 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 PRR18Q8N4B5 295 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 OR11H6Q8NGC7 330 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 SETD6Q8TBK2 473 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 LEAP2Q969E1 77 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 SLC25A38Q96DW6 304 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 DCSTAMPQ9H295 470 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 LINC00574Q9H8X3 128 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 ZMAT3Q9HA38 289 aaKnown RBP14.22□□□□□ -0.13
SHMT2-225ENST00000556798 RHBDL2Q9NX52 303 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 KCNK7Q9Y2U2 307 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 FAM96BQ9Y3D0 163 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 ETV7Q9Y603 341 aa14.22□□□□□ -0.13
SHMT2-225ENST00000556798 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 NAPSAO96009 420 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 GZMHP20718 246 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 LGALS4P56470 323 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 BAMBIQ13145 260 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 FAM189A2Q15884 450 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 OR52W1Q6IF63 320 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 FAM53AQ6NSI3 398 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-225ENST00000556798 USP43Q70EL4 1123 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 ABHD12Q8N2K0 398 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 OR1L1Q8NH94 360 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 AJUBAQ96IF1 538 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 MBNL3Q9NUK0 354 aaKnown RBP14.21□□□□□ -0.13
SHMT2-225ENST00000556798 ABRACLQ9P1F3 81 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 ZNRD1Q9P1U0 126 aa14.21□□□□□ -0.13
SHMT2-225ENST00000556798 ATRQ13535 2644 aa14.21□□□□□ -0.14
SHMT2-225ENST00000556798 DNAJC9-AS1A6NH13 148 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 MFNGO00587 321 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 ORC5O43913 435 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 MELTFP08582 738 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 HIST1H1DP16402 221 aaKnown RBP14.2□□□□□ -0.14
SHMT2-225ENST00000556798 SCAND1P57086 179 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 LDLRAD2Q5SZI1 272 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 ZDHHC22Q8N966 263 aa14.2□□□□□ -0.14
SHMT2-225ENST00000556798 CMSS1Q9BQ75 279 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms