RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 PDZK1IP1Q13113 114 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 SCGB2A2Q13296 93 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 EDDM3AQ14507 147 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CCDC58Q4VC31 144 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 GPR157Q5UAW9 335 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 XAF1Q6GPH4 301 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 METAP1DQ6UB28 335 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-243ENST00000556671 BRD3OSQ6XYD6 125 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 GDPD3Q7L5L3 318 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CEACAM19Q7Z692 300 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 TRAPPC6BQ86SZ2 158 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 FAM58AQ8N1B3 248 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 JAGN1Q8N5M9 183 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 TEX29Q8N6K0 151 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CD177Q8N6Q3 437 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 POC1AQ8NBT0 407 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 OR10K1Q8NGX5 313 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 HAVCR2Q8TDQ0 301 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF418Q8TF45 676 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-243ENST00000556671 ZFAND2BQ8WV99 257 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 TNFAIP8L1Q8WVP5 186 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 SGCDQ92629 289 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 ITFG2Q969R8 447 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 TMEM106AQ96A25 262 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CEP19Q96LK0 163 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 MND1Q9BWT6 205 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CHST5Q9GZS9 411 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 PLCXD1Q9NUJ7 323 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 TAS2R4Q9NYW5 299 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 MTCH1Q9NZJ7 389 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CNOT2Q9NZN8 540 aaKnown RBP3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CTSZQ9UBR2 303 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 CKLFQ9UBR5 152 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 RAB26Q9ULW5 256 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 PCDHGB5Q9Y5G0 923 aa3.83□□□□□ -1.8
ATXN3-243ENST00000556671 SOX21Q9Y651 276 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-243ENST00000556671 MTORP42345 2549 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 IGKV1D-17A0A075B6S4 117 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 DHRS7CA6NNS2 312 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF879B4DU55 563 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 HSPB6O14558 160 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 TCF21O43680 179 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SULT1B1O43704 296 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 CDRT1O95170 752 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 HAND1O96004 215 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 MT-ND2P03891 347 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 LIPFP07098 398 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SFTPBP07988 381 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 PGA5P0DJD9 388 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF44P15621 663 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SERPINA2P20848 420 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 CCL1P22362 96 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 BDKRB2P30411 391 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF93P35789 620 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 DLX1P56177 255 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 TAS2R43P59537 309 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 PAX8Q06710 450 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 IL24Q13007 206 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 BAMBIQ13145 260 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 HNF4GQ14541 408 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 CDK5R1Q15078 307 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 KISS1Q15726 138 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 GRK1Q15835 563 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 DGUOKQ16854 277 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 DDI2Q5TDH0 399 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 LAIR2Q6ISS4 152 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SPSB3Q6PJ21 355 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 UTS2BQ765I0 119 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SIGLECL1Q8N7X8 197 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 DNAAF1Q8NEP3 725 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 OR52N1Q8NH53 320 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 UFD1Q92890 307 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 WDFY2Q96P53 400 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 OR5M11Q96RB7 305 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SLC6A7Q99884 636 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF649Q9BS31 505 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms