RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 C4orf36Q96KX1 117 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 PPIL3Q9H2H8 161 aaKnown RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 CHCHD3Q9NX63 227 aaKnown RBP9.3□□□□□ -0.92
ACTN1-221ENST00000556571 IDI2-AS1Q9NZ38 188 aa9.3□□□□□ -0.92
ACTN1-221ENST00000556571 MEIKINA0A087WXM9 373 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 J3QRE1 110 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 HSD17B6O14756 317 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 IGHG4P01861 327 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 MT-ND2P03891 347 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 GAPDHP04406 335 aaKnown RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 RPSAP08865 295 aaKnown RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 KIR3DL2P43630 455 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 GBX2P52951 348 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 ZNF816Q0VGE8 651 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 MRPL28Q13084 256 aaKnown RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 CDK5R1Q15078 307 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 TMPRSS11AQ6ZMR5 421 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 MOB3BQ86TA1 216 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 SYS1Q8N2H4 156 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 Q8N9W7 124 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 OR52I1Q8NGK6 324 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 OR13A1Q8NGR1 328 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 OR2G2Q8NGZ5 317 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 OR2T10Q8NGZ9 312 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 CNIH3Q8TBE1 160 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 EAF1Q96JC9 268 aaPredicted RBP9.29□□□□□ -0.92
ACTN1-221ENST00000556571 BARHL1Q9BZE3 327 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 ZMAT4Q9H898 229 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 NEK6Q9HC98 313 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 KIF25Q9UIL4 384 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 MYRFQ9Y2G1 1151 aa9.29□□□□□ -0.92
ACTN1-221ENST00000556571 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 WBP4O75554 376 aaKnown RBP9.28□□□□□ -0.92
ACTN1-221ENST00000556571 DCKP27707 260 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 GNG10P50151 68 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 ISL1P61371 349 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 ADARB1P78563 741 aaKnown RBP9.28□□□□□ -0.92
ACTN1-221ENST00000556571 SMN1Q16637 294 aaKnown RBP9.28□□□□□ -0.92
ACTN1-221ENST00000556571 LTC4SQ16873 150 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 FAM27D1Q5T7N8 215 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 Q8N6K4 173 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 OR5D18Q8NGL1 313 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 RFESDQ8TAC1 157 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 APH1BQ8WW43 257 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 PELI1Q96FA3 418 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 SPACA5Q96QH8 159 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 MRPS18AQ9NVS2 196 aaKnown RBP9.28□□□□□ -0.92
ACTN1-221ENST00000556571 ERVK13-1Q9NX77 482 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 GAR1Q9NY12 217 aaKnown RBP9.28□□□□□ -0.92
ACTN1-221ENST00000556571 FRRS1LQ9P0K9 344 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 DNAH1Q9P2D7 4330 aa9.28□□□□□ -0.92
ACTN1-221ENST00000556571 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 H0YJX3 145 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 HSPB6O14558 160 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 ISG15P05161 165 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 OR5H8P0DN80 308 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 TMEM225BP0DP42 221 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 VDAC1P21796 283 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 PSMB8P28062 276 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 CCR9P51686 369 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 PAX5Q02548 391 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 CFHR3Q02985 330 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 ALKBH1Q13686 389 aaKnown RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 PAN3Q58A45 887 aaKnown RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 FDX2Q6P4F2 183 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 ZNF429Q86V71 674 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 OR8H1Q8NGG4 311 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 OR13C3Q8NGS6 347 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 OR13C9Q8NGT0 318 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 RASL11BQ9BPW5 248 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 FGF20Q9NP95 211 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 PLSCR3Q9NRY6 295 aa9.27□□□□□ -0.93
ACTN1-221ENST00000556571 NKX1-2Q9UD57 310 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 EXOSC1Q9Y3B2 195 aaKnown RBP9.27□□□□□ -0.93
ACTN1-221ENST00000556571 TRAV24A0A0B4J272 114 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 A0A1W2PPE3 182 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 EFCAB10A6NFE3 127 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 TMEM212A6NML5 194 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 MOSP00540 346 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 IGF1P05019 195 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 GNAO1P09471 354 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 FRMD6-AS1P0C7T7 363 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 CD1BP29016 333 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 SOX6P35712 828 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 REG1BP48304 166 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 KCNJ3P48549 501 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 MTNR1BP49286 362 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 RSBN1Q5VWQ0 802 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-221ENST00000556571 OVCH2Q7RTZ1 564 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 OR5AK2Q8NH90 309 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 MRGPRDQ8TDS7 321 aa9.26□□□□□ -0.93
ACTN1-221ENST00000556571 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms