RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CYBAP13498 195 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 CSRP1P21291 193 aaKnown RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 RPL12P30050 165 aaKnown RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 FAUP35544 74 aaKnown RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 G6PCP35575 357 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 GLRXP35754 106 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ZNF93P35789 620 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 CTRLP40313 264 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ZNF133P52736 654 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 ATP1B3P54709 279 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 SEC11AP67812 179 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ARG2P78540 354 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PSG9Q00887 426 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SPHARQ15513 63 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PLK5Q496M5 336 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ACTL10Q5JWF8 245 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SPATA31B1PQ5VZV4 182 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ENPP7Q6UWV6 458 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PRRT2Q7Z6L0 340 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 ZNF429Q86V71 674 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ZNF595Q8IYB9 648 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 C1orf174Q8IYL3 243 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 OR2L13Q8N349 312 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 TEX29Q8N6K0 151 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ZNF548Q8NEK5 533 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 OR13A1Q8NGR1 328 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 OR8S1Q8NH09 359 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PPTC7Q8NI37 304 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ACER1Q8TDN7 264 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SLC38A5Q8WUX1 472 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 TWIST2Q8WVJ9 160 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 BAALCQ8WXS3 180 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 OR5P3Q8WZ94 311 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 NDRG1Q92597 394 aaKnown RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 LRRC58Q96CX6 371 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 HPDLQ96IR7 371 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 NIPSNAP3BQ9BS92 247 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 GABARAPL3Q9BY60 117 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SLC17A9Q9BYT1 436 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 DEFB129Q9H1M3 183 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 ACP6Q9NPH0 428 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SLC52A3Q9NQ40 469 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 TMEM74BQ9NUR3 256 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 NUDT4Q9NZJ9 180 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 CES1P1Q9UKY3 287 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 MRC1P22897 1456 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 RGPD1P0DJD0 1748 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 FER1L6Q2WGJ9 1857 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ATRNL1Q5VV63 1379 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 XIRP1Q702N8 1843 aaKnown RBP5.3□□□□□ -1.56
TDP1-215ENST00000556498 TRDV1A0A1B0GX56 115 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 DUXBA0A1W2PPF3 345 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 MYADML2A6NDP7 307 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TLCD2A6NGC4 264 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 FOXI3A8MTJ6 420 aaPredicted RBP5.3□□□□□ -1.56
TDP1-215ENST00000556498 MS4A18H0YCH9 400 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 H0YIG0 161 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 GABARAPH6UMI1 98 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 K7EN84 100 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TBL1XO60907 577 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 HYPMO75409 117 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 CYB5AP00167 134 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 PTHP01270 115 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 REG1AP05451 166 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ANKRD34CP0C6C1 535 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 LIMS3P0CW19 117 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 LIMS4P0CW20 117 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 GYPEP15421 78 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ZNF37AP17032 561 aaPredicted RBP5.3□□□□□ -1.56
TDP1-215ENST00000556498 GATA3P23771 443 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 CDK2P24941 298 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 PSMB4P28070 264 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 PRDX3P30048 256 aaKnown RBP5.3□□□□□ -1.56
TDP1-215ENST00000556498 NSG1P42857 185 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 CRISP3P54108 245 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 DUSP2Q05923 314 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 KLRD1Q13241 179 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 MELKQ14680 651 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 CCL15Q16663 113 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TP53I3Q53FA7 332 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TMEM215Q68D42 235 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 SLC18B1Q6NT16 456 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ANKRD16Q6P6B7 361 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ADAMTSL5Q6ZMM2 481 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 ZCCHC23Q6ZST2 131 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 CEACAM19Q7Z692 300 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 STHQ8IWL8 128 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 BLIDQ8IZY5 108 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 MUC20Q8N307 709 aaPredicted RBP5.3□□□□□ -1.56
TDP1-215ENST00000556498 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 OR8G5Q8NG78 346 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 OR2M3Q8NG83 312 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TMEM125Q96AQ2 219 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 PYGO2Q9BRQ0 406 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 MLST8Q9BVC4 326 aa5.3□□□□□ -1.56
TDP1-215ENST00000556498 GGTLC1Q9BX51 225 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms