RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IGKV1D-33P01593 117 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 IGKV1-33P01594 117 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 RIPK1Q13546 671 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 MOB3BQ86TA1 216 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 LINC00596Q86U02 117 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 CCDC107Q8WV48 283 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 GHSRQ92847 366 aa17.9■□□□□ 0.46
ACTN1-220ENST00000556433 NOL4LQ96MY1 436 aaPredicted RBP17.9■□□□□ 0.46
ACTN1-220ENST00000556433 DIMT1Q9UNQ2 313 aaKnown RBP17.9■□□□□ 0.46
ACTN1-220ENST00000556433 EXOSC1Q9Y3B2 195 aaKnown RBP17.9■□□□□ 0.46
ACTN1-220ENST00000556433 SERPINE3A8MV23 424 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 CCRL2O00421 344 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 FGF16O43320 207 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 GAPDHP04406 335 aaKnown RBP17.89■□□□□ 0.45
ACTN1-220ENST00000556433 IGFBP3P17936 291 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-220ENST00000556433 MPV17LQ2QL34 196 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 SLC22A6Q4U2R8 563 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 UBALD1Q8TB05 177 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 NEK7Q8TDX7 302 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 CHPT1Q8WUD6 406 aa17.89■□□□□ 0.45
ACTN1-220ENST00000556433 ZNF184Q99676 751 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-220ENST00000556433 CHCHD3Q9NX63 227 aaKnown RBP17.89■□□□□ 0.45
ACTN1-220ENST00000556433 TRBV5-5A0A0J9YX44 114 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 A0A1W2PP11 408 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 C15orf65H3BRN8 121 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 EBAG9O00559 213 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 SDCBPO00560 298 aaPredicted RBP17.88■□□□□ 0.45
ACTN1-220ENST00000556433 HSD17B6O14756 317 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 DUS4LO95620 317 aaKnown RBP17.88■□□□□ 0.45
ACTN1-220ENST00000556433 GTF2F2P13984 249 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 REG1BP48304 166 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 DMKNQ6E0U4 476 aaPredicted RBP17.88■□□□□ 0.45
ACTN1-220ENST00000556433 OR52M1Q8NGK5 317 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 TMEM80Q96HE8 168 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 CKLFQ9UBR5 152 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 LINC00527Q9UJ94 153 aa17.88■□□□□ 0.45
ACTN1-220ENST00000556433 IGHV1-3A0A0C4DH29 117 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 GPX5O75715 221 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 MT-ND4P03905 459 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 ZNF816Q0VGE8 651 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-220ENST00000556433 MED21Q13503 144 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 GPR176Q14439 515 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 Q499Y3 187 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 SLC35E3Q7Z769 313 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 LINC00482Q8N8I6 264 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 ZFP41Q8N8Y5 198 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 CYGBQ8WWM9 190 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 GFOD1Q9NXC2 390 aa17.87■□□□□ 0.45
ACTN1-220ENST00000556433 IGHV3-72A0A0B4J1Y9 119 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 MAGEA13PA6NCF6 341 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 ORC5O43913 435 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 RPL23AP62750 156 aaKnown RBP17.86■□□□□ 0.45
ACTN1-220ENST00000556433 EBI3Q14213 229 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 LRRC36Q1X8D7 754 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 YIF1BQ5BJH7 314 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 TTC23Q5W5X9 447 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 FAM53AQ6NSI3 398 aaPredicted RBP17.86■□□□□ 0.45
ACTN1-220ENST00000556433 STX19Q8N4C7 294 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 LINC00311Q8N616 119 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 OR51D1Q8NGF3 324 aa17.86■□□□□ 0.45
ACTN1-220ENST00000556433 EAF1Q96JC9 268 aaPredicted RBP17.86■□□□□ 0.45
ACTN1-220ENST00000556433 TRAV8-7A0A075B6U6 113 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 IGHV3-43A0A0B4J1X8 118 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 A0A1W2PPK0 400 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 NCBP2LA6PVI3 153 aaKnown RBP17.85■□□□□ 0.45
ACTN1-220ENST00000556433 K7EIL1 84 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 AIPO00170 330 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 IGHG2P01859 326 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 IGHV3-43DP0DP04 118 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 KRTAP10-11P60412 298 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 RPS11P62280 158 aaKnown RBP eCLIP17.85■□□□□ 0.45
ACTN1-220ENST00000556433 SLC35B1P78383 322 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 ZNF497Q6ZNH5 498 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 FOXRED2Q8IWF2 684 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 MRPL41Q8IXM3 137 aaKnown RBP17.85■□□□□ 0.45
ACTN1-220ENST00000556433 JAGN1Q8N5M9 183 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 GGHQ92820 318 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 MUL1Q969V5 352 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 ZFP57Q9NU63 452 aa17.85■□□□□ 0.45
ACTN1-220ENST00000556433 LINC01548A6NM66 108 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 NUDT19A8MXV4 375 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 MCRIP1C9JLW8 97 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 IL3RAP26951 378 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 DEFB121Q5J5C9 76 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 GLIPR1L1Q6UWM5 242 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 ETV3LQ6ZN32 361 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 C18orf65Q6ZTR6 163 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 OR2W3Q7Z3T1 314 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 C8orf31Q8N9H6 132 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 SETD9Q8NE22 299 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 OR2T10Q8NGZ9 312 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 PGLYRP3Q96LB9 341 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 SPACA1Q9HBV2 294 aa17.84■□□□□ 0.45
ACTN1-220ENST00000556433 MRPS28Q9Y2Q9 187 aaKnown RBP17.84■□□□□ 0.45
ACTN1-220ENST00000556433 HOXD3P31249 432 aaPredicted RBP17.83■□□□□ 0.44
ACTN1-220ENST00000556433 THBS3P49746 956 aa17.83■□□□□ 0.44
ACTN1-220ENST00000556433 ST3GAL4Q11206 333 aa17.83■□□□□ 0.44
ACTN1-220ENST00000556433 C8orf86Q6ZUL3 223 aa17.83■□□□□ 0.44
ACTN1-220ENST00000556433 TGIF2LXQ8IUE1 241 aa17.83■□□□□ 0.44
ACTN1-220ENST00000556433 IZUMO1Q8IYV9 350 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms