RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 CLPXO76031 633 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 FSHBP01225 129 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CGB3P0DN86 165 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CGB7P0DN87 165 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 IGHV4-38-2P0DP08 117 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CDK2P24941 298 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 DLX1P56177 255 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 GUCA2AQ02747 115 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 SCGB2A2Q13296 93 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 C17orf58Q2M2W7 97 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 HEPN1Q6WQI6 88 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 ZNF782Q6ZMW2 699 aaPredicted RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 MRPL30Q8TCC3 161 aaKnown RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CMTM3Q96MX0 182 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 CMSS1Q9BQ75 279 aaKnown RBP11.59□□□□□ -0.55
SNX6-206ENST00000556162 KCNIP1Q9NZI2 227 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 NAV3Q8IVL0 2385 aa11.59□□□□□ -0.55
SNX6-206ENST00000556162 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 MFNGO00587 321 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 ORC5O43913 435 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 CD3GP09693 182 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 RCC1P18754 421 aaPredicted RBP11.58□□□□□ -0.56
SNX6-206ENST00000556162 OMGP23515 440 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 BPIFB3P59826 476 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
SNX6-206ENST00000556162 OLFML2AQ68BL7 652 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 OR52W1Q6IF63 320 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 RFESDQ8TAC1 157 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 ARL11Q969Q4 196 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 RAB9BQ9NP90 201 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 C12orf4Q9NQ89 552 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 CCDC59Q9P031 241 aaKnown RBP11.58□□□□□ -0.56
SNX6-206ENST00000556162 SESN1Q9Y6P5 492 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
SNX6-206ENST00000556162 TRAV18A0A075B6X5 111 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 NAPSAO96009 420 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 FAM157CP0CG43 387 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 SSTR5P35346 364 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 UBE2E1P51965 193 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 ARFRP1Q13795 201 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 OR13D1Q8NGV5 346 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 SETD6Q8TBK2 473 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 DGCR14Q96DF8 476 aaKnown RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 MS4A7Q9GZW8 240 aaPredicted RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 MBNL3Q9NUK0 354 aaKnown RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 NPIPB11E5RHQ5 1161 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 SPINT2O43291 252 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 MMP23AO75900 390 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 APOA1P02647 267 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 GSTP1P09211 210 aaKnown RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 FPR2P25090 351 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 TALDO1P37837 337 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 KLRD1Q13241 179 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 BRD3OSQ6XYD6 125 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 ZNF554Q86TJ5 538 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 OR10A7Q8NGE5 316 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 HDHD3Q9BSH5 251 aaPredicted RBP11.57□□□□□ -0.56
SNX6-206ENST00000556162 TMEM133Q9H2Q1 129 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 TAF9BQ9HBM6 251 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNX6-206ENST00000556162 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
SNX6-206ENST00000556162 TRBV6-6A0A0A6YYG2 114 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 C12orf77C9JDV5 145 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 C15orf65H3BRN8 121 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 XRCC3O43542 346 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 HPGDSO60760 199 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 EPHA1P21709 976 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 COX7A1P24310 79 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 NFYBP25208 207 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 LTC4SQ16873 150 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 HACD4Q5VWC8 232 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 MOB1BQ7L9L4 216 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 PNKDQ8N490 385 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 PRR18Q8N4B5 295 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 KIRREL1Q96J84 757 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 ZNF69Q9UC07 566 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 MGAT4AQ9UM21 535 aa11.56□□□□□ -0.56
SNX6-206ENST00000556162 A0A1W2PRD5 423 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 A0A1W2PRF3 423 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 A0A1W2PRM7 423 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
SNX6-206ENST00000556162 MNDAP41218 407 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 PITPNAQ00169 270 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 PNLIPRP3Q17RR3 467 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms