RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 METTL9Q9H1A3 318 aa14.85□□□□□ -0.03
CDKN3-209ENST00000556102 NBEAL2Q6ZNJ1 2754 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 IGHV1-3A0A0C4DH29 117 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 LOC100130705A0A1B0GUX0 176 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 CCRL2O00421 344 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 CSTBP04080 98 aaKnown RBP14.84□□□□□ -0.03
CDKN3-209ENST00000556102 CCDC58Q4VC31 144 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 RPL22L1Q6P5R6 122 aaKnown RBP14.84□□□□□ -0.03
CDKN3-209ENST00000556102 MOB3BQ86TA1 216 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 LINC00596Q86U02 117 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 TGIF2LXQ8IUE1 241 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 IZUMO1Q8IYV9 350 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 OR52M1Q8NGK5 317 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 OR52N1Q8NH53 320 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 TMEM138Q9NPI0 162 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDKN3-209ENST00000556102 ING4Q9UNL4 249 aa14.84□□□□□ -0.03
CDKN3-209ENST00000556102 C15orf65H3BRN8 121 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 GEMIN2O14893 280 aaKnown RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 ZNF93P35789 620 aaPredicted RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 REG1BP48304 166 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 PPP3R1P63098 170 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 CD69Q07108 199 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 DCTN2Q13561 401 aaKnown RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 MPV17LQ2QL34 196 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 DDI2Q5TDH0 399 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 XAF1Q6GPH4 301 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 ZNF695Q8IW36 515 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 LINC00311Q8N616 119 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 C8orf31Q8N9H6 132 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 APH1BQ8WW43 257 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 ARL11Q969Q4 196 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 EAF1Q96JC9 268 aaPredicted RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 S100A13Q99584 98 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 SLC29A1Q99808 456 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 B9D2Q9BPU9 175 aa14.83□□□□□ -0.04
CDKN3-209ENST00000556102 FGF20Q9NP95 211 aaPredicted RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 PAK1IP1Q9NWT1 392 aaPredicted RBP14.83□□□□□ -0.04
CDKN3-209ENST00000556102 IGHV3-72A0A0B4J1Y9 119 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 AP4M1O00189 453 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 SDCBPO00560 298 aaPredicted RBP14.82□□□□□ -0.04
CDKN3-209ENST00000556102 SERPINA2P20848 420 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 BDKRB2P30411 391 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 C10orf67Q8IYJ2 551 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 Q8N6K4 173 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 OR2T10Q8NGZ9 312 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 ABCG5Q9H222 651 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 LIN7CQ9NUP9 197 aaKnown RBP14.82□□□□□ -0.04
CDKN3-209ENST00000556102 GFOD1Q9NXC2 390 aa14.82□□□□□ -0.04
CDKN3-209ENST00000556102 ZMAT5Q9UDW3 170 aaKnown RBP14.82□□□□□ -0.04
CDKN3-209ENST00000556102 LINC01548A6NM66 108 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 NCBP2LA6PVI3 153 aaKnown RBP14.81□□□□□ -0.04
CDKN3-209ENST00000556102 H0YHG0 523 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 ORC5O43913 435 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 ZNF780AO75290 641 aaPredicted RBP14.81□□□□□ -0.04
CDKN3-209ENST00000556102 IL3RAP26951 378 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 GPR12P47775 334 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 ATAD3CQ5T2N8 411 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 TEX38Q6PEX7 206 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 UNQ9370/PRO34162Q6UXP9 181 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 GON7Q9BXV9 100 aa14.81□□□□□ -0.04
CDKN3-209ENST00000556102 DCKP27707 260 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 CD1BP29016 333 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 ETV1P50549 477 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 SMN1Q16637 294 aaKnown RBP14.8□□□□□ -0.04
CDKN3-209ENST00000556102 PNLIPRP3Q17RR3 467 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 Q3ZCU0 254 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 TMPRSS11AQ6ZMR5 421 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 ZNF497Q6ZNH5 498 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 Q8N9W7 124 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 TMEM104Q8NE00 496 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 UBALD1Q8TB05 177 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 NEK7Q8TDX7 302 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 CCDC107Q8WV48 283 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 RTN4IP1Q8WWV3 396 aaPredicted RBP14.8□□□□□ -0.04
CDKN3-209ENST00000556102 ST6GALNAC6Q969X2 333 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 RAX2Q96IS3 184 aa14.8□□□□□ -0.04
CDKN3-209ENST00000556102 IGHV3-43A0A0B4J1X8 118 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 AIPO00170 330 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 CCL24O00175 119 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 OGG1O15527 345 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 WBP4O75554 376 aaKnown RBP14.79□□□□□ -0.04
CDKN3-209ENST00000556102 MOSP00540 346 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 MT-ND4P03905 459 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 IGHV3-43DP0DP04 118 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 GTF2F2P13984 249 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 GP2P55259 537 aaKnown RBP14.79□□□□□ -0.04
CDKN3-209ENST00000556102 DGCR2P98153 550 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 RIPK1Q13546 671 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 SLC22A6Q4U2R8 563 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 OR2G6Q5TZ20 316 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 FAM53AQ6NSI3 398 aaPredicted RBP14.79□□□□□ -0.04
CDKN3-209ENST00000556102 STX19Q8N4C7 294 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 ORAI1Q96D31 301 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 SMIM19Q96E16 107 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 DUX3Q96PT4 197 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 ZNF184Q99676 751 aaPredicted RBP14.79□□□□□ -0.04
CDKN3-209ENST00000556102 TENM3Q9P273 2699 aa14.79□□□□□ -0.04
CDKN3-209ENST00000556102 SIRT4Q9Y6E7 314 aaPredicted RBP14.79□□□□□ -0.04
CDKN3-209ENST00000556102 A0A1W2PP11 408 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms