RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
CHGA-204ENST00000556076 ISYNA1Q9NPH2 558 aa12.91□□□□□ -0.34
CHGA-204ENST00000556076 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
CHGA-204ENST00000556076 A0A087X0M5 115 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 A0A1B0GX30 115 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 PIN1P1O15428 100 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
CHGA-204ENST00000556076 PEX14O75381 377 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 IL1AP01583 271 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 OPN1MWP04001 364 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 PRRX1P54821 245 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 C5orf24Q7Z6I8 188 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 CAPSLQ8WWF8 208 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 CCDC90BQ9GZT6 254 aa12.9□□□□□ -0.34
CHGA-204ENST00000556076 LSM2Q9Y333 95 aaKnown RBP12.9□□□□□ -0.34
CHGA-204ENST00000556076 IGHV3-43A0A0B4J1X8 118 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 J3QR06 171 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 CSTBP04080 98 aaKnown RBP12.89□□□□□ -0.35
CHGA-204ENST00000556076 MAS1P04201 325 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 IGHV3-43DP0DP04 118 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 BRS3P32247 399 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 GPR176Q14439 515 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 HNF4GQ14541 408 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 C9orf152Q5JTZ5 239 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 ZNF565Q8N9K5 539 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 OR5AU1Q8NGC0 362 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 OR9G1Q8NH87 305 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 UFD1Q92890 307 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 TOMM40LQ969M1 308 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 R3HDM4Q96D70 268 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 BANF2Q9H503 90 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
CHGA-204ENST00000556076 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
CHGA-204ENST00000556076 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
CHGA-204ENST00000556076 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
CHGA-204ENST00000556076 CEACAM3P40198 252 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 REG1BP48304 166 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 TRAM1Q15629 374 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 DRAM1Q8N682 238 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 NKAIN3Q8N8D7 197 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 NEK7Q8TDX7 302 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 RBM14Q96PK6 669 aaKnown RBP12.88□□□□□ -0.35
CHGA-204ENST00000556076 LINC00574Q9H8X3 128 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 LIN7BQ9HAP6 207 aa12.88□□□□□ -0.35
CHGA-204ENST00000556076 MRPS14O60783 128 aaKnown RBP12.87□□□□□ -0.35
CHGA-204ENST00000556076 OR2F2O95006 317 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 NHLRC3Q5JS37 347 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 GLIPR1L1Q6UWM5 242 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 UNQ9370/PRO34162Q6UXP9 181 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 TMEM104Q8NE00 496 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 RPEQ96AT9 228 aa12.87□□□□□ -0.35
CHGA-204ENST00000556076 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 C15orf65H3BRN8 121 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 DENRO43583 198 aaKnown RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 HSMCR30P0CW71 290 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 GP2P55259 537 aaKnown RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 MLLT11Q13015 90 aaPredicted RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 TPBGQ13641 420 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 NDUFA11Q86Y39 141 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 PHYHIPQ92561 330 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 YTHDF1Q9BYJ9 559 aaKnown RBP12.86□□□□□ -0.35
CHGA-204ENST00000556076 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 NCOR1P1Q9H4R4 102 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 IFT22Q9H7X7 185 aa12.86□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A18PA6NE21 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A16PA6NEW6 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A20PA6NIJ5 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A12PA8MX19 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A5PA8MXJ8 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 SLC31A2O15432 143 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 MT-ND4P03905 459 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A15PP0C7V4 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A13PP0C7W8 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A14PP0C7W9 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 FAM90A24PP0C7X0 464 aa12.85□□□□□ -0.35
CHGA-204ENST00000556076 GTF2F2P13984 249 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms