RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PHYHIPQ92561 330 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 TOMM40LQ969M1 308 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 RPEQ96AT9 228 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 SLC25A33Q9BSK2 321 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 ING3Q9NXR8 418 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 SCN3BQ9NY72 215 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 PSG11Q9UQ72 335 aa9.47□□□□□ -0.89
VRK1-204ENST00000555351 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.89
VRK1-204ENST00000555351 MCRIP1C9JLW8 97 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 C15orf65H3BRN8 121 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 KCNAB3O43448 404 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 PEX14O75381 377 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 SC5DO75845 299 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 MT-ND4P03905 459 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 UBBP0CG47 229 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 JUNBP17275 347 aaPredicted RBP9.46□□□□□ -0.9
VRK1-204ENST00000555351 ZNF816Q0VGE8 651 aaPredicted RBP9.46□□□□□ -0.9
VRK1-204ENST00000555351 HABP2Q14520 560 aaPredicted RBP9.46□□□□□ -0.9
VRK1-204ENST00000555351 ARSJQ5FYB0 599 aaPredicted RBP9.46□□□□□ -0.9
VRK1-204ENST00000555351 GLIPR1L1Q6UWM5 242 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
VRK1-204ENST00000555351 MUL1Q969V5 352 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 ORAI1Q96D31 301 aa9.46□□□□□ -0.9
VRK1-204ENST00000555351 FAM172BPA6NC97 362 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 MAGEA13PA6NCF6 341 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 PIN1P1O15428 100 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 FGF16O43320 207 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 CD37P11049 281 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 FUT3P21217 361 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 SSTR5P35346 364 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 SLC35A2P78381 396 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 SPHARQ15513 63 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 ATAD3CQ5T2N8 411 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 C6orf183Q5T699 404 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 STEAP3Q658P3 488 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 Q6ZS46 218 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 OR4F17Q8NGA8 305 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 NEK7Q8TDX7 302 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 Q96M66 194 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 OR4F4Q96R69 305 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 CST11Q9H112 138 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 ZNF581Q9P0T4 197 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
VRK1-204ENST00000555351 MOB4Q9Y3A3 225 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 TPRKBQ9Y3C4 175 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
VRK1-204ENST00000555351 A0A1W2PP11 408 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 A0A1W2PPI3 338 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 A0A1W2PPK0 400 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 H0YHG0 523 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 AIPO00170 330 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 CCRL2O00421 344 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 MAS1P04201 325 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 GAPDHP04406 335 aaKnown RBP9.44□□□□□ -0.9
VRK1-204ENST00000555351 AMY1AP04745 511 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 AMY2AP04746 511 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 CD28P10747 220 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 MGMTP16455 207 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 LOXL3P58215 753 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 CD83Q01151 205 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 EBI3Q14213 229 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 IRF3Q14653 427 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 ACSM3Q53FZ2 586 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 C1orf100Q5SVJ3 147 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 UTF1Q5T230 341 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 RAB12Q6IQ22 244 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 RFESDQ8TAC1 157 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 ARL11Q969Q4 196 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 ANKRD60Q9BZ19 345 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 VCX3BQ9H321 246 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 DUSP21Q9H596 190 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 ISYNA1Q9NPH2 558 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
VRK1-204ENST00000555351 NKX1-2Q9UD57 310 aaPredicted RBP9.44□□□□□ -0.9
VRK1-204ENST00000555351 PNMA8CA0A1B0GUJ8 204 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 PTGES3LE9PB15 166 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 SDCBPO00560 298 aaPredicted RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 SPINT2O43291 252 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 TXNL1O43396 289 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 PDCD6O75340 191 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 LPLP06858 475 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 MYF6P23409 242 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 CD24P25063 80 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 PSMA1P25786 263 aaKnown RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 IL3RAP26951 378 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 RANBP1P43487 201 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 HSPA13P48723 471 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 ZNF137PP52743 207 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 GABPB1Q06547 395 aaPredicted RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 TRAM1Q15629 374 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 ABCA11PQ4W5N1 156 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 GLT8D1Q68CQ7 371 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 CENPVQ7Z7K6 275 aaPredicted RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 TMEM104Q8NE00 496 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms