RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LPLP06858 475 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF735P0CB33 412 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 FUT3P21217 361 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 EDDM3BP56851 147 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 RPL31P62899 125 aaKnown RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 SSBP1Q04837 148 aaKnown RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 CR1LQ2VPA4 569 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 PAN3Q58A45 887 aaKnown RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF57Q68EA5 555 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 Q71RC1 249 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 FAM185AQ8N0U4 392 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 OR4D10Q8NGI6 311 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 DMRTB1Q96MA1 342 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 HDHD3Q9BSH5 251 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-218ENST00000555213 DCTN5Q9BTE1 182 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 SHARPINQ9H0F6 387 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 C7orf69Q9H7B7 122 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 AK3Q9UIJ7 227 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 METRNQ9UJH8 293 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 CDC42EP3Q9UKI2 254 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 INSIG2Q9Y5U4 225 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 ZFHX3Q15911 3703 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 ABCA2Q9BZC7 2435 aa9.02□□□□□ -0.97
SHMT2-218ENST00000555213 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 MTORP42345 2549 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 KIR2DS1A0A191URI9 304 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 hCG_1809904A0A1W2PP81 198 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 A0A1W2PPE2 198 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 A0A1W2PR64 198 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 A0A1W2PRV1 198 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 TMEM82A0PJX8 343 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 PDCD6O75340 191 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 PTTG1O95997 202 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 CD74P04233 296 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 PPIAL4GP0DN37 164 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 LMO1P25800 156 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 SLC6A1P30531 599 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 KCNJ3P48549 501 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 SCGB2A2Q13296 93 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 EDDM3AQ14507 147 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 ATAD3CQ5T2N8 411 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 METTL11BQ5VVY1 283 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 CCBE1Q6UXH8 406 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-218ENST00000555213 TRAPPC6BQ86SZ2 158 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 TOMM5Q8N4H5 51 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 KIR3DL3Q8N743 410 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 TMEM229BQ8NBD8 167 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 OR4S1Q8NGB4 309 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 C8orf46Q8TAG6 207 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 NEK7Q8TDX7 302 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 DYRK2Q92630 601 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 SNAPC3Q92966 411 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 BEX2Q9BXY8 128 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 CHST6Q9GZX3 395 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 PPA2Q9H2U2 334 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 MMP26Q9NRE1 261 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 ONECUT1Q9UBC0 465 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF230Q9UIE0 474 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-218ENST00000555213 AUP1Q9Y679 476 aa9.01□□□□□ -0.97
SHMT2-218ENST00000555213 AKAP9Q99996 3911 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 MALRD1Q5VYJ5 2156 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 hADV38S2A0JD32 116 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 UBE2QL1A1L167 161 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 SERPINE3A8MV23 424 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 SLC33A1O00400 549 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 HSPB6O14558 160 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 PSPNO60542 156 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 MT-ND4P03905 459 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 CD3DP04234 171 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 CSN2P05814 226 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 GLAP06280 429 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 GSTT2BP0CG30 244 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 SRP14P37108 136 aaKnown RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 OR3A1P47881 315 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 P2RX3P56373 397 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 DEFA1P59665 94 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 DEFA3P59666 94 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 PAX2Q02962 417 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 MEF2CQ06413 473 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 RBM39Q14498 530 aaKnown RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 ATXN7L3Q14CW9 347 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 CHRFAM7AQ494W8 412 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 FAM120AOSQ5T036 256 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 OR52W1Q6IF63 320 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 C17orf107Q6ZR85 190 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 C5orf24Q7Z6I8 188 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 HOGA1Q86XE5 327 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 GAPTQ8N292 157 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 FGFRL1Q8N441 504 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 SUMF2Q8NBJ7 301 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 MINDY2Q8NBR6 621 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 DPCDQ9BVM2 203 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 MMP28Q9H239 520 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 ZNF107Q9UII5 783 aaPredicted RBP9□□□□□ -0.97
SHMT2-218ENST00000555213 KPTNQ9Y664 436 aa9□□□□□ -0.97
SHMT2-218ENST00000555213 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
SHMT2-218ENST00000555213 FCN3O75636 299 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms