RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 ALG8Q9BVK2 526 aa12.16□□□□□ -0.46
NEDD1-207ENST00000555114 DPCDQ9BVM2 203 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-207ENST00000555114 CHCHD3Q9NX63 227 aaKnown RBP12.16□□□□□ -0.46
NEDD1-207ENST00000555114 IGHV3-72A0A0B4J1Y9 119 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
NEDD1-207ENST00000555114 TXNL1O43396 289 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 HTR3BO95264 441 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 MOSP00540 346 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 CD1BP29016 333 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 RASSF2P50749 326 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
NEDD1-207ENST00000555114 GALEQ14376 348 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 PIGYQ3MUY2 71 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 LINC00311Q8N616 119 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 RNF152Q8N8N0 203 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 Q8N9W7 124 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 SUMF2Q8NBJ7 301 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 S100A13Q99584 98 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
NEDD1-207ENST00000555114 EXOGQ9Y2C4 368 aaKnown RBP12.15□□□□□ -0.46
NEDD1-207ENST00000555114 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
NEDD1-207ENST00000555114 SAC3D1A6NKF1 404 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 GABRPO00591 440 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 OR7C1O76099 320 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-207ENST00000555114 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
NEDD1-207ENST00000555114 CD2P06729 351 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 CHATP28329 748 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 SOX6P35712 828 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 INSL3P51460 131 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 Q3ZCU0 254 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 LINC00596Q86U02 117 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 Q8N6K4 173 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 Q8NFD4 153 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 RTN4IP1Q8WWV3 396 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-207ENST00000555114 ARL11Q969Q4 196 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 S1PR3Q99500 378 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 ASCL2Q99929 193 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 METTL9Q9H1A3 318 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 PAK1IP1Q9NWT1 392 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-207ENST00000555114 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
NEDD1-207ENST00000555114 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 LY86O95711 162 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 FADS2O95864 444 aaKnown RBP12.13□□□□□ -0.47
NEDD1-207ENST00000555114 IGHG4P01861 327 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 GBX2P52951 348 aaPredicted RBP12.13□□□□□ -0.47
NEDD1-207ENST00000555114 NKAPLQ5M9Q1 402 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 LHFPL3Q86UP9 236 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 STX19Q8N4C7 294 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 NEK7Q8TDX7 302 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 LGALS12Q96DT0 336 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 CHCHD6Q9BRQ6 235 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
NEDD1-207ENST00000555114 ORC5O43913 435 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 OR8U8P0C7N1 319 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 PPP3R1P63098 170 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 MPV17LQ2QL34 196 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 TMEM30BQ3MIR4 351 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 NHLRC3Q5JS37 347 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 TMEM65Q6PI78 240 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 OR11H1Q8NG94 326 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 Q96MT0 163 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 PDCD1LG2Q9BQ51 273 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 GFOD1Q9NXC2 390 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF580Q9UK33 172 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF780AO75290 641 aaPredicted RBP12.11□□□□□ -0.47
NEDD1-207ENST00000555114 IGF1P05019 195 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 RBM11P57052 281 aaKnown RBP12.11□□□□□ -0.47
NEDD1-207ENST00000555114 FHL3Q13643 280 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 TMEM104Q8NE00 496 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 GPR148Q8TDV2 347 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 KCTD7Q96MP8 289 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 JAM3Q9BX67 310 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 ISG20L2Q9H9L3 353 aaKnown RBP12.11□□□□□ -0.47
NEDD1-207ENST00000555114 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF107Q9UII5 783 aaPredicted RBP12.11□□□□□ -0.47
NEDD1-207ENST00000555114 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 AIPO00170 330 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 SPINT2O43291 252 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 CIB2O75838 187 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 CDRT1O95170 752 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 ALPLP05186 524 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 SERPINA2P20848 420 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 PSMB8P28062 276 aa12.1□□□□□ -0.47
NEDD1-207ENST00000555114 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms