RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 CDRT1O95170 752 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 HTR3BO95264 441 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 SLC35B1P78383 322 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 KLHL22Q53GT1 634 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 ZFP1Q6P2D0 407 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 ZNF695Q8IW36 515 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 GPR148Q8TDV2 347 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
ARHGEF40-205ENST00000555052 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 NUDT19A8MXV4 375 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 GEMIN2O14893 280 aaKnown RBP12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 CD2P06729 351 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 GZMHP20718 246 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 GPR12P47775 334 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 REG1BP48304 166 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 CD69Q07108 199 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 LINC00596Q86U02 117 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 SLC29A1Q99808 456 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 ABCG5Q9H222 651 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 TMEM138Q9NPI0 162 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 PLSCR3Q9NRY6 295 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
ARHGEF40-205ENST00000555052 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 AP4M1O00189 453 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 CCDC58Q4VC31 144 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 RPL22L1Q6P5R6 122 aaKnown RBP12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 TEX38Q6PEX7 206 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 MOB3BQ86TA1 216 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 Q8N9W7 124 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 OR52N1Q8NH53 320 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 METTL9Q9H1A3 318 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 FAM118AQ9NWS6 357 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
ARHGEF40-205ENST00000555052 LOC100130705A0A1B0GUX0 176 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 CCL24O00175 119 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 ORC5O43913 435 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZNF93P35789 620 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 DCTN2Q13561 401 aaKnown RBP12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 MPV17LQ2QL34 196 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 Q3ZCU0 254 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 DDI2Q5TDH0 399 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 OR2T10Q8NGZ9 312 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 UBALD1Q8TB05 177 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 WWC2-AS2Q96NR7 200 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 ING4Q9UNL4 249 aa12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 SIRT4Q9Y6E7 314 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-205ENST00000555052 A0A1W2PP11 408 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 SDCBPO00560 298 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 MT-ND4P03905 459 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 IGFBP3P17936 291 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 CD1BP29016 333 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 BDKRB2P30411 391 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 ETV1P50549 477 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZNF137PP52743 207 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 PPP3R1P63098 170 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 DGCR2P98153 550 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 CFHR3Q02985 330 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 FOXE3Q13461 319 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 PNLIPRP3Q17RR3 467 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZNF439Q8NDP4 499 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 ORAI1Q96D31 301 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 PAK1IP1Q9NWT1 392 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 RCC2Q9P258 522 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZMAT5Q9UDW3 170 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-205ENST00000555052 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
ARHGEF40-205ENST00000555052 TRBV5-5A0A0J9YX44 114 aa12.29□□□□□ -0.44
ARHGEF40-205ENST00000555052 ZNF736B4DX44 427 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-205ENST00000555052 SLC31A2O15432 143 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms