RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 NHLRC3Q5JS37 347 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 RSBN1Q5VWQ0 802 aaPredicted RBP8.57□□□□□ -1.04
PNN-203ENST00000554117 AWAT2Q6E213 333 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 BAIAP2L2Q6UXY1 529 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 Q6ZS46 218 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 DHRSXQ8N5I4 330 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 DRAM1Q8N682 238 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 RFESDQ8TAC1 157 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
PNN-203ENST00000554117 RASL11BQ9BPW5 248 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 GNG12Q9UBI6 72 aa8.57□□□□□ -1.04
PNN-203ENST00000554117 DIMT1Q9UNQ2 313 aaKnown RBP8.57□□□□□ -1.04
PNN-203ENST00000554117 NOTCH1P46531 2555 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 NPIPB11E5RHQ5 1161 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 E9PI62 339 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 LY6LH3BQJ8 138 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 AP4M1O00189 453 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 MPIG6BO95866 241 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 PRB2P02812 416 aaPredicted RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 SSTR5P35346 364 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 GDNFP39905 211 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 RANBP1P43487 201 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 ETV1P50549 477 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 ZNF816Q0VGE8 651 aaPredicted RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 HNF4GQ14541 408 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 Q3ZCU0 254 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 CXorf66Q5JRM2 361 aaPredicted RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 FOXB2Q5VYV0 432 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 TEX38Q6PEX7 206 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 TGIF2LXQ8IUE1 241 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 PACRGLQ8N7B6 248 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 NKAIN3Q8N8D7 197 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 OR8H1Q8NGG4 311 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 WIPF2Q8TF74 440 aaPredicted RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 CCDC107Q8WV48 283 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 LEAP2Q969E1 77 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 SLC29A1Q99808 456 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 CST11Q9H112 138 aa8.56□□□□□ -1.04
PNN-203ENST00000554117 AURKAIP1Q9NWT8 199 aaPredicted RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 MRPS28Q9Y2Q9 187 aaKnown RBP8.56□□□□□ -1.04
PNN-203ENST00000554117 IGHV1-3A0A0C4DH29 117 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 OGG1O15527 345 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 CA11O75493 328 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 RGS11O94810 467 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 VDAC1P21796 283 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 RAB25P57735 213 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 DOC2BQ14184 412 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 OR2G6Q5TZ20 316 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 ZNF529Q6P280 563 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 ASCL4Q6XD76 172 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 CDH26Q8IXH8 852 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 C8orf59Q8N0T1 100 aaPredicted RBP8.55□□□□□ -1.04
PNN-203ENST00000554117 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 Q8NFD4 153 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 PLPPR1Q8TBJ4 325 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 GHSRQ92847 366 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 LINC00574Q9H8X3 128 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.55□□□□□ -1.04
PNN-203ENST00000554117 LIN7CQ9NUP9 197 aaKnown RBP8.55□□□□□ -1.04
PNN-203ENST00000554117 ETAA1Q9NY74 926 aa8.55□□□□□ -1.04
PNN-203ENST00000554117 SIRT4Q9Y6E7 314 aaPredicted RBP8.55□□□□□ -1.04
PNN-203ENST00000554117 A0A1W2PPI3 338 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A10PA6NDY2 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A18PA6NE21 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A16PA6NEW6 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A20PA6NIJ5 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A7PA6NKC0 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 SH2D7A6NKC9 451 aaPredicted RBP8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A9PA6NNJ1 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A12PA8MX19 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A5PA8MXJ8 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A23PA8MXZ1 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
PNN-203ENST00000554117 MOSP00540 346 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 MAS1P04201 325 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A15PP0C7V4 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A13PP0C7W8 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A14PP0C7W9 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FAM90A24PP0C7X0 464 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 OR5H8P0DN80 308 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 CGB3P0DN86 165 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 CGB7P0DN87 165 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 FSTP19883 344 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 CD1BP29016 333 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 RPL23AP62750 156 aaKnown RBP8.54□□□□□ -1.04
PNN-203ENST00000554117 ST3GAL4Q11206 333 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 SMN1Q16637 294 aaKnown RBP8.54□□□□□ -1.04
PNN-203ENST00000554117 LRRC36Q1X8D7 754 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 SYT6Q5T7P8 510 aaPredicted RBP8.54□□□□□ -1.04
PNN-203ENST00000554117 RAB12Q6IQ22 244 aa8.54□□□□□ -1.04
PNN-203ENST00000554117 GLIPR1L1Q6UWM5 242 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms