RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SCN1BQ07699 218 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 ATXN7L3Q14CW9 347 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM95Q3KNT9 176 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 PAN3Q58A45 887 aaKnown RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 SYT6Q5T7P8 510 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 UNQ9370/PRO34162Q6UXP9 181 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 BAIAP2L2Q6UXY1 529 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 Q6ZPA2 131 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 RNF144BQ7Z419 303 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 CENPVQ7Z7K6 275 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 LINC00596Q86U02 117 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 SPARTQ8N0X7 666 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 LYG1Q8N1E2 194 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 TSPAN14Q8NG11 270 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 TSEN15Q8WW01 171 aaKnown RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 BARHL1Q9BZE3 327 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 PPIL3Q9H2H8 161 aaKnown RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 IL36GQ9NZH8 169 aa5.27□□□□□ -1.57
SLIRP-203ENST00000554074 TSSC4Q9Y5U2 329 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-203ENST00000554074 DNAH3Q8TD57 4116 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 MEIKINA0A087WXM9 373 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TRBV5-7A0A0A0MS05 114 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 A0A1W2PPI3 338 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TCRBV4S1A1TA0A5B7 111 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 J3QR06 171 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 CCRL2O00421 344 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 GABRPO00591 440 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PIN1P1O15428 100 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 FGF16O43320 207 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 SC5DO75845 299 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 ARL6IP5O75915 188 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 DUS4LO95620 317 aaKnown RBP5.26□□□□□ -1.57
SLIRP-203ENST00000554074 LPLP06858 475 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PF4V1P10720 104 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 CD33P20138 364 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 GZMHP20718 246 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 SLC6A1P30531 599 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 GLP1RP43220 463 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 RAB7AP51149 207 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PSMD7P51665 324 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 GTF2A1P52655 376 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-203ENST00000554074 LOXL3P58215 753 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PPP3R1P63098 170 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 MADCAM1Q13477 382 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 DOC2BQ14184 412 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TIMM50Q3ZCQ8 353 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 ABCA11PQ4W5N1 156 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OXLD1Q5BKU9 147 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TCTEX1D4Q5JR98 221 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 RSBN1Q5VWQ0 802 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-203ENST00000554074 HIST2H2BDQ6DRA6 164 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OR8H3Q8N146 312 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OSR2Q8N2R0 312 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 NKAIN3Q8N8D7 197 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 C8orf31Q8N9H6 132 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OR4X2Q8NGF9 303 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OR13A1Q8NGR1 328 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TNFAIP8L1Q8WVP5 186 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 RGP1Q92546 391 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TOMM40LQ969M1 308 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM106AQ96A25 262 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 RPEQ96AT9 228 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PHF21AQ96BD5 680 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 OR5M11Q96RB7 305 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 GPER1Q99527 375 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM138Q9NPI0 162 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 NDUFB11Q9NX14 153 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 CALYQ9NYX4 217 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 IDI2-AS1Q9NZ38 188 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 KIF25Q9UIL4 384 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 PSG11Q9UQ72 335 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 MOB4Q9Y3A3 225 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 SIRT4Q9Y6E7 314 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-203ENST00000554074 COL7A1Q02388 2944 aa5.26□□□□□ -1.57
SLIRP-203ENST00000554074 TRDV1A0A1B0GX56 115 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 MAGEA13PA6NCF6 341 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM127O75204 238 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF780AO75290 641 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 LALBAP00709 142 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 UCHL1P09936 223 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 HSMCR30P0CW71 290 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 IGFBP3P17936 291 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 CD24P25063 80 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 NFYBP25208 207 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 FGF9P31371 208 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF93P35789 620 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 OR3A4PP47883 348 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 RBM11P57052 281 aaKnown RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 RPS11P62280 158 aaKnown RBP eCLIP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF816Q0VGE8 651 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 GPR176Q14439 515 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 RBM39Q14498 530 aaKnown RBP5.25□□□□□ -1.57
SLIRP-203ENST00000554074 RSU1Q15404 277 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 MPV17LQ2QL34 196 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 PIGYQ3MUY2 71 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 Q3ZCU0 254 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 ACSM3Q53FZ2 586 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 LIPKQ5VXJ0 399 aa5.25□□□□□ -1.57
SLIRP-203ENST00000554074 XAF1Q6GPH4 301 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms