RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 L7N2F9 121 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ACAA1P09110 424 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ID4P47928 161 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 BSPH1Q075Z2 132 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 SURF2Q15527 256 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 BEX5Q5H9J7 111 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ACP7Q6ZNF0 438 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 Q8IYB0 196 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 DMRTA2Q96SC8 542 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 SLC2A9Q9NRM0 540 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ATP23Q9Y6H3 246 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 SH2D1BO14796 132 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 IFNA2P01563 188 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 OR5AC1P0C628 307 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 HERV-K104P61576 105 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 RBPJQ06330 500 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 CDSNQ15517 529 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ABCA11PQ4W5N1 156 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ADAM5Q6NVV9 412 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 PCSK4Q6UW60 755 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 MOGAT3Q86VF5 341 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 ZCCHC14Q8WYQ9 949 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 TLNRD1Q9H1K6 362 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
VIPAS39-206ENST00000553888 CD8AP01732 235 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 GRNP28799 593 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 AESQ08117 197 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 KLRB1Q12918 225 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 OPCMLQ14982 345 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 ITLN1Q8WWA0 313 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 RTN4IP1Q8WWV3 396 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 METTL8Q9H825 291 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 RASL12Q9NYN1 266 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 COQ3Q9NZJ6 369 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 PRSS44E7EML9 344 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 HSD17B6O14756 317 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 NDUFA2O43678 99 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 RGS11O94810 467 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 HLA-GP17693 338 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 RBM39Q14498 530 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 CYB5R2Q6BCY4 276 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 UNQ6494/PRO21346Q6UXR6 183 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF497Q6ZNH5 498 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 TRAPPC2LQ9UL33 140 aa10.72□□□□□ -0.69
VIPAS39-206ENST00000553888 FAM90A27PA6NNH2 459 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TNFSF12O43508 249 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TUBG1P23258 451 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 GNRHRP30968 328 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TEX261Q6UWH6 196 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 GSG1LQ6UXU4 331 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF818PQ6ZRF7 136 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 Q6ZS49 121 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 COQ8AQ8NI60 647 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 MRPL24Q96A35 216 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TUBG2Q9NRH3 451 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ELOVL5Q9NYP7 299 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 U3KQ87 197 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 NKX2-6A6NCS4 301 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TK1P04183 234 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 HLA-DRB3P79483 266 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 COL10A1Q03692 680 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 SRSF4Q08170 494 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 SPIN3Q5JUX0 258 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF880Q6PDB4 577 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TMUB2Q71RG4 321 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ZNF546Q86UE3 836 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 CD177Q8N6Q3 437 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 NEUROG1Q92886 237 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 TP53RKQ96S44 253 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 VKORC1Q9BQB6 163 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ARL6Q9H0F7 186 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 ESRP2Q9H6T0 727 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 GSKIPQ9P0R6 139 aa10.71□□□□□ -0.69
VIPAS39-206ENST00000553888 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 M0R233 179 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 NUPL2O15504 423 aaKnown RBP10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 LPCAT3Q6P1A2 487 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 FOXRED2Q8IWF2 684 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 GAPTQ8N292 157 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 ZNF680Q8NEM1 530 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 LHFPL5Q8TAF8 219 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 MEGF10Q96KG7 1140 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 DCTN5Q9BTE1 182 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 MFFQ9GZY8 342 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 NAA60Q9H7X0 242 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 TUBD1Q9UJT1 453 aa10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.7
VIPAS39-206ENST00000553888 ABCA4P78363 2273 aa10.7□□□□□ -0.7
VIPAS39-206ENST00000553888 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
VIPAS39-206ENST00000553888 H0YIZ8 118 aa10.7□□□□□ -0.7
VIPAS39-206ENST00000553888 S100A9P06702 114 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms