RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 GHITMQ9H3K2 345 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 ZCCHC4Q9H5U6 513 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 REEP1Q9H902 201 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 CLN6Q9NWW5 311 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 CHCHD3Q9NX63 227 aaKnown RBP6.9□□□□□ -1.3
PRKCH-208ENST00000553846 ZNF581Q9P0T4 197 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 ACTR3BQ9P1U1 418 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 STUB1Q9UNE7 303 aa6.9□□□□□ -1.3
PRKCH-208ENST00000553846 MRPS28Q9Y2Q9 187 aaKnown RBP6.9□□□□□ -1.3
PRKCH-208ENST00000553846 MUC4Q99102 2169 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 TRAV39A0A0B4J263 110 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 PRKYO43930 277 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CCDC22O60826 627 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 RGS11O94810 467 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 BRI3O95415 125 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 EGR2P11161 476 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CBX1P83916 185 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 BNIP1Q12981 228 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 LSAMPQ13449 338 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 LTC4SQ16873 150 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 AADACL4Q5VUY2 407 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 ELP2Q6IA86 826 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 TMEM65Q6PI78 240 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CYP2R1Q6VVX0 501 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 RDH10Q8IZV5 341 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 OR52M1Q8NGK5 317 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 GIPC3Q8TF64 312 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CASTOR1Q8WTX7 329 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CMTM5Q96DZ9 223 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 FAM53CQ9NYF3 392 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 CEPT1Q9Y6K0 416 aa6.89□□□□□ -1.31
PRKCH-208ENST00000553846 H0YJX3 145 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 HSPB6O14558 160 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 DEGS1O15121 323 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 APOL3O95236 402 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 HSPB1P04792 205 aaKnown RBP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 PRKACBP22694 351 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 C21orf33P30042 268 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 MECP2P51608 486 aaKnown RBP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 ZNF134P52741 427 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 EWSR1Q01844 656 aaKnown RBP eCLIP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 SCN1BQ07699 218 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 Q3ZCU0 254 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
PRKCH-208ENST00000553846 HS3ST5Q8IZT8 346 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 OR5D18Q8NGL1 313 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 CNIH3Q8TBE1 160 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 RHOVQ96L33 236 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 OPALINQ96PE5 141 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 OR4C12Q96R67 309 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 PARP11Q9NR21 331 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 KRT84Q9NSB2 600 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
PRKCH-208ENST00000553846 HERC1Q15751 4861 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 IZUMO1RA6ND01 250 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 M0R129 80 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 TXNL1O43396 289 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 DEDDO75618 318 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 NDUFA3O95167 84 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 SERPINA3P01011 423 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 UBCP0CG48 685 aaKnown RBP6.87□□□□□ -1.31
PRKCH-208ENST00000553846 KCNJ3P48549 501 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 RAB40BQ12829 278 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 MMDQ15546 238 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 C5orf64Q2M2E5 130 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 PAN3Q58A45 887 aaKnown RBP6.87□□□□□ -1.31
PRKCH-208ENST00000553846 NPBQ8NG41 125 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 OR10AC1Q8NH08 325 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 ELAC2Q9BQ52 826 aaKnown RBP6.87□□□□□ -1.31
PRKCH-208ENST00000553846 ANKRD60Q9BZ19 345 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 SIGLEC8Q9NYZ4 499 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 FOXA2Q9Y261 457 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-208ENST00000553846 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
PRKCH-208ENST00000553846 A0A1W2PQL4 384 aaPredicted RBP6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ZNF670-ZNF695F2Z2N8 137 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ARPC1BO15143 372 aaKnown RBP6.86□□□□□ -1.31
PRKCH-208ENST00000553846 SLC25A17O43808 307 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 LANCL1O43813 399 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 SULT1C4O75897 302 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ISG15P05161 165 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ACTBP60709 375 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ACTR3P61158 418 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 KLF5Q13887 457 aaPredicted RBP6.86□□□□□ -1.31
PRKCH-208ENST00000553846 IL13RA2Q14627 380 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 CT45A1Q5HYN5 189 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 CD200R1LQ6Q8B3 271 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ANKRD13BQ86YJ7 626 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 OR51A4Q8NGJ6 313 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 CT45A3Q8NHU0 189 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 FGGYQ96C11 551 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 FLYWCH2Q96CP2 140 aaKnown RBP6.86□□□□□ -1.31
PRKCH-208ENST00000553846 ST6GALNAC5Q9BVH7 336 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
PRKCH-208ENST00000553846 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms