RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF688P0C7X2 276 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 LCN1P31025 176 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 UGT2B10P36537 528 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 KCNJ3P48549 501 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ATP5J2P56134 94 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 MYL6P60660 151 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 RPL23P62829 140 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PRR3P79522 188 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ADIGQ0VDE8 80 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PIGHQ14442 188 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 OR1Q1Q15612 314 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 AVPI1Q5T686 147 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FAM27D1Q5T7N8 215 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SYT6Q5T7P8 510 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FAHD1Q6P587 224 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FBXW12Q6X9E4 464 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ASCL4Q6XD76 172 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CLEC20AQ6ZU45 233 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TRMT10CQ7L0Y3 403 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SETD3Q86TU7 594 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 LRRC8AQ8IWT6 810 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 NELFCDQ8IXH7 590 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SLC7A5P1Q8MH63 180 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CA13Q8N1Q1 262 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 C17orf78Q8N4C9 275 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 C12orf29Q8N999 325 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CYB561A3Q8NBI2 242 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 OR10W1Q8NGF6 305 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 OR5AR1Q8NGP9 310 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 OR9A2Q8NGT5 310 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CLHC1Q8NHS4 586 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ANGPTL6Q8NI99 470 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SYNPRQ8TBG9 265 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 NT5CQ8TCD5 201 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 LMX1AQ8TE12 382 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 DCAKDQ8WVC6 231 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 RXFP2Q8WXD0 754 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CACNG8Q8WXS5 425 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PTX4Q96A99 478 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TMIGD2Q96BF3 282 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TMA16Q96EY4 203 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SMARCD1Q96GM5 515 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ANKRD36BP1Q96IX9 119 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF681Q96N22 645 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ZFP3Q96NJ6 502 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 COL21A1Q96P44 957 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PDCD1LG2Q9BQ51 273 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 NDFIP1Q9BT67 221 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 RSG1Q9BU20 258 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ARV1Q9H2C2 271 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SAV1Q9H4B6 383 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PARVGQ9HBI0 331 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SPACA1Q9HBV2 294 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TMBIM4Q9HC24 238 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SLC40A1Q9NP59 571 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 EXOSC4Q9NPD3 245 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FBXO8Q9NRD0 319 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TREX1Q9NSU2 369 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 STMN3Q9NZ72 180 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 DNAJC27Q9NZQ0 273 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 STX18Q9P2W9 335 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 HMGXB4Q9UGU5 601 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SLC7A11Q9UPY5 501 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 PSG8Q9UQ74 426 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 KLF12Q9Y4X4 402 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 MYH10P35580 1976 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 DCHS2Q6V1P9 2916 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PIKFYVEQ9Y2I7 2098 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV2OR16-5A0A0B4J2B6 119 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 A0A0J9YXV3 536 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF233A6NK53 670 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 TRPC5OSA6NMA1 111 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 MANBAO00462 879 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 TAAR5O14804 337 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CTNSO60931 367 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SNAP29O95721 258 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CST4P01036 141 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 IGLV2-23P01705 113 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CTSLP07711 333 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV1-8P0DP01 117 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PGAM1P18669 254 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SYT1P21579 422 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 RPA3P35244 121 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 MYCNOSP40205 109 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 NDUFA8P51970 172 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CRISP3P54108 245 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OR12D2P58182 307 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 RPS24P62847 133 aaKnown RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CDK5Q00535 292 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CDC20Q12834 499 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 EIF3IQ13347 325 aaKnown RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 XRCC4Q13426 336 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 FLOT2Q14254 428 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 MAPRE2Q15555 327 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PSG3Q16557 428 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CDNFQ49AH0 187 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 MPV17L2Q567V2 206 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 HHATQ5VTY9 493 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 Q5W150 140 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 HBMQ6B0K9 141 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms