RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RHOVQ96L33 236 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 RHOFQ9HBH0 211 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
PRPF39-204ENST00000553605 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
PRPF39-204ENST00000553605 TRAV39A0A0B4J263 110 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 IZUMO1RA6ND01 250 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 H0YJX3 145 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 TPPPO94811 219 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 RPP14O95059 124 aaKnown RBP10.47□□□□□ -0.73
PRPF39-204ENST00000553605 ATF1P18846 271 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 CD81P60033 236 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 PAN3Q58A45 887 aaKnown RBP10.47□□□□□ -0.73
PRPF39-204ENST00000553605 LIN54Q6MZP7 749 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 CGB2Q6NT52 195 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 FAHD1Q6P587 224 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 C8orf31Q8N9H6 132 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 OR9G4Q8NGQ1 327 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 ANKRD60Q9BZ19 345 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
PRPF39-204ENST00000553605 FAM118AQ9NWS6 357 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 SAMHD1Q9Y3Z3 626 aaKnown RBP10.47□□□□□ -0.73
PRPF39-204ENST00000553605 MUC4Q99102 2169 aa10.47□□□□□ -0.73
PRPF39-204ENST00000553605 VPS13DQ5THJ4 4388 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 CCDC182A6NF36 153 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 SDCBPO00560 298 aaPredicted RBP10.46□□□□□ -0.73
PRPF39-204ENST00000553605 ARPC2O15144 300 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 ZP3P21754 424 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 KLF5Q13887 457 aaPredicted RBP10.46□□□□□ -0.73
PRPF39-204ENST00000553605 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.73
PRPF39-204ENST00000553605 PYHIN1Q6K0P9 492 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 DEFB125Q8N687 156 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 TCTEX1D1Q8N7M0 179 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 OR10G2Q8NGC3 310 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 OR52M1Q8NGK5 317 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 OR5D18Q8NGL1 313 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 MS4A10Q96PG2 267 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 CNN2Q99439 309 aaKnown RBP10.46□□□□□ -0.73
PRPF39-204ENST00000553605 FEVQ99581 238 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 NEURL2Q9BR09 285 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 CST11Q9H112 138 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 REEP1Q9H902 201 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 ETAA1Q9NY74 926 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 MYRFQ9Y2G1 1151 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 FBXO7Q9Y3I1 522 aa10.46□□□□□ -0.73
PRPF39-204ENST00000553605 TRAV24A0A0B4J272 114 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 HSD17B1P14061 328 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 GZMHP20718 246 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 TPPP2P59282 170 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 ACTBP60709 375 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 CDK5Q00535 292 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 SLC25A48Q6ZT89 311 aaKnown RBP10.45□□□□□ -0.74
PRPF39-204ENST00000553605 HDXQ7Z353 690 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 SAXO1Q8IYX7 474 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 SPSB1Q96BD6 273 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 KCTD12Q96CX2 325 aaKnown RBP10.45□□□□□ -0.74
PRPF39-204ENST00000553605 ADAT3Q96EY9 351 aaPredicted RBP10.45□□□□□ -0.74
PRPF39-204ENST00000553605 RITA1Q96K30 269 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 OPALINQ96PE5 141 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF251Q9BRH9 671 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 SRD5A3Q9H8P0 318 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 NEK6Q9HC98 313 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 FGFR1OP2Q9NVK5 253 aa10.45□□□□□ -0.74
PRPF39-204ENST00000553605 APOL3O95236 402 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 OCM2P0CE71 109 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 OCMP0CE72 109 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF137PP52743 207 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-204ENST00000553605 NDPQ00604 133 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 EWSR1Q01844 656 aaKnown RBP eCLIP10.44□□□□□ -0.74
PRPF39-204ENST00000553605 PAX5Q02548 391 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 TMEM267Q0VDI3 215 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-204ENST00000553605 LSAMPQ13449 338 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 LRRC36Q1X8D7 754 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 OR2T5Q6IEZ7 315 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 UTS2BQ765I0 119 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 SLC35F2Q8IXU6 374 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 OR2T29Q8NH02 315 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 CNIH3Q8TBE1 160 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 ARL11Q969Q4 196 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 NR1H4Q96RI1 486 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-204ENST00000553605 OVOL2Q9BRP0 275 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 GFOD1Q9NXC2 390 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 SLC2A8Q9NY64 477 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 NUBP2Q9Y5Y2 271 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 A3GALT2U3KPV4 340 aa10.44□□□□□ -0.74
PRPF39-204ENST00000553605 IGHV3-43A0A0B4J1X8 118 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 A0A0J9YWU9 116 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 ZNF670-ZNF695F2Z2N8 137 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 C15orf65H3BRN8 121 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 SLC31A2O15432 143 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 NBR2O15453 112 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 CSTBP04080 98 aaKnown RBP10.43□□□□□ -0.74
PRPF39-204ENST00000553605 CSN3P07498 182 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 CD7P09564 240 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 IGHV3-43DP0DP04 118 aa10.43□□□□□ -0.74
PRPF39-204ENST00000553605 CD40LGP29965 261 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms