RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FABP5Q01469 135 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 UNC119Q13432 240 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 HSD17B12Q53GQ0 312 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 PLA1AQ53H76 456 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 CD200R1LQ6Q8B3 271 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 WIPF2Q8TF74 440 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-227ENST00000553256 ZNF702PQ9H963 129 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 SIGLEC9Q9Y336 463 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 MEGF8Q7Z7M0 2845 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 TMEM30CPA0ZSE6 113 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 TMEM14DPA8MWL7 114 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 GLAP06280 429 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 GABARAPL2P60520 117 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 EMX1Q04741 257 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-227ENST00000553256 OR10K2Q6IF99 312 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 FAM53AQ6NSI3 398 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-227ENST00000553256 SLC16A12Q6ZSM3 486 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 OR9G1Q8NH87 305 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 RFESDQ8TAC1 157 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 TM2D1Q9BX74 207 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 SELENOIQ9C0D9 397 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 SPACA1Q9HBV2 294 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 TCF7L1Q9HCS4 588 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 PSG11Q9UQ72 335 aa15.47■□□□□ 0.07
PTCH1-227ENST00000553256 SHISA3A0PJX4 238 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A9PA6NNJ1 464 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 J3QR06 171 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 F2RL2O00254 374 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 ORC5O43913 435 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 MRPS14O60783 128 aaKnown RBP15.46■□□□□ 0.07
PTCH1-227ENST00000553256 UBBP0CG47 229 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 HSMCR30P0CW71 290 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 GZMHP20718 246 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 PSMA1P25786 263 aaKnown RBP15.46■□□□□ 0.07
PTCH1-227ENST00000553256 TRAM1Q15629 374 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 ATAD3CQ5T2N8 411 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 TPTE2P1Q5T6R2 138 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 RAB12Q6IQ22 244 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 Q6ZPA2 131 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 ZNF367Q7RTV3 350 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 CCDC90BQ9GZT6 254 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 MMP28Q9H239 520 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 RAB18Q9NP72 206 aa15.46■□□□□ 0.07
PTCH1-227ENST00000553256 A0A0A6YYD4 124 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 FOXI3A8MTJ6 420 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-227ENST00000553256 LEUTXA8MZ59 168 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 CRTAPO75718 401 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-227ENST00000553256 FUT3P21217 361 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 GABRA5P31644 462 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 RPS27AP62979 156 aaKnown RBP15.45■□□□□ 0.06
PTCH1-227ENST00000553256 GLT8D1Q68CQ7 371 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 Q6ZS46 218 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 TMEM219Q86XT9 240 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 OR52M1Q8NGK5 317 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 NDNFQ8TB73 568 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 LEAP2Q969E1 77 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 KCNK15Q9H427 330 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 SERTAD4Q9NUC0 356 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 MBNL3Q9NUK0 354 aaKnown RBP15.45■□□□□ 0.06
PTCH1-227ENST00000553256 BLOC1S6Q9UL45 172 aa15.45■□□□□ 0.06
PTCH1-227ENST00000553256 C12orf77C9JDV5 145 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 PDCD6O75340 191 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 CA11O75493 328 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 CHATP28329 748 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 DIAPH2-AS1Q14236 149 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 UBE2UQ5VVX9 321 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 SPARTQ8N0X7 666 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 LINC00311Q8N616 119 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 C8orf31Q8N9H6 132 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 OR6M1Q8NGM8 313 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 CFHR4Q92496 578 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 FAM46BQ96A09 425 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 NDUFB11Q9NX14 153 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 PEX16Q9Y5Y5 336 aa15.44■□□□□ 0.06
PTCH1-227ENST00000553256 A0A1W2PPI3 338 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 OOSP1A8MZH6 123 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 MCRIP1C9JLW8 97 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 SLC17A2O00624 439 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 LDLRAD4O15165 306 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 AMY1AP04745 511 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 AMY2AP04746 511 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 NFYBP25208 207 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 HTR2CP28335 458 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 PRRX1P54821 245 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 BLCAPP62952 87 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 HABP2Q14520 560 aaPredicted RBP15.43■□□□□ 0.06
PTCH1-227ENST00000553256 FAM89BQ8N5H3 189 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 ZNF439Q8NDP4 499 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 MRPL30Q8TCC3 161 aaKnown RBP15.43■□□□□ 0.06
PTCH1-227ENST00000553256 CCDC107Q8WV48 283 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 ST6GALNAC6Q969X2 333 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 CREB3L1Q96BA8 519 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 NPFFR1Q9GZQ6 430 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 CST11Q9H112 138 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 GFOD1Q9NXC2 390 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 ETAA1Q9NY74 926 aa15.43■□□□□ 0.06
PTCH1-227ENST00000553256 AIPO00170 330 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 BPNT1O95861 308 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 MPIG6BO95866 241 aa15.42■□□□□ 0.06
PTCH1-227ENST00000553256 IGHV3-7P01780 117 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms