RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 TFF1P04155 84 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 CTXN2P0C2S0 81 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SUPT4H1P63272 117 aaKnown RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 CYB5R2Q6BCY4 276 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 C20orf204Q6ZNR8 217 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 CCDC71LQ8N9Z2 235 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 MOB3AQ96BX8 217 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 DNTTIP1Q9H147 329 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SLC2A9Q9NRM0 540 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ASCL1P50553 236 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 TNFAIP6P98066 277 aaPredicted RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 DHODHQ02127 395 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 LGALSLQ3ZCW2 172 aaPredicted RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 C11orf53Q8IXP5 236 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 PLPPR1Q8TBJ4 325 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 PPP1R1CQ8WVI7 109 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 MRPL24Q96A35 216 aaKnown RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 DMRTA2Q96SC8 542 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SLC5A7Q9GZV3 580 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 RASL12Q9NYN1 266 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 KCNIP1Q9NZI2 227 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 JKAMPQ9P055 326 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SPTBN1Q01082 2364 aaKnown RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ANKHD1Q8IWZ3 2542 aaKnown RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 DPRXA6NFQ7 191 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF98A6NK75 572 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 G3V3Q6 166 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 PTBP3O95758 552 aaKnown RBP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 CD200P41217 278 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 POLR2GP62487 172 aaKnown RBP eCLIP6.98□□□□□ -1.29
RAB5B-210ENST00000553116 EDDM3AQ14507 147 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ANKRD55Q3KP44 614 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SP6Q3SY56 376 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF600Q6ZNG1 722 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 SSX8Q7RTT4 187 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 NBEAQ8NFP9 2946 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 THAP6Q8TBB0 222 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 C2CD4CQ8TF44 421 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 WFIKKN1Q96NZ8 548 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 TREM2Q9NZC2 230 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 NUP50Q9UKX7 468 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 IGHV3OR15-7A0A075B7D8 119 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 TMEM30CPA0ZSE6 113 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 HSD17B6O14756 317 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 IFNA21P01568 189 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 SFTPCP11686 197 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 M6PRP20645 277 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 COL10A1Q03692 680 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 MEX3BQ6ZN04 569 aaKnown RBP6.97□□□□□ -1.29
RAB5B-210ENST00000553116 Q6ZS49 121 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 OR4A4PQ8NGN8 299 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 OR11L1Q8NGX0 322 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 ESRP2Q9H6T0 727 aaKnown RBP6.97□□□□□ -1.29
RAB5B-210ENST00000553116 NAA60Q9H7X0 242 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 HES4Q9HCC6 221 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 PKD1L2Q7Z442 2459 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 IGLV3-9A0A075B6K5 115 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 NKX2-6A6NCS4 301 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 CRYM-AS1A6NIL9 109 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 PHF1O43189 567 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-210ENST00000553116 PSPNO60542 156 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 THBDP07204 575 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 OR4A8P0C604 315 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 IRF2P14316 349 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 S100GP29377 79 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 CHRNB4P30926 498 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 S100A10P60903 97 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 AESQ08117 197 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 HERPUD1Q15011 391 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF497Q6ZNH5 498 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 FOXRED2Q8IWF2 684 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 ZFP82Q8N141 532 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 NUP37Q8NFH4 326 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 CA5BP1Q8WTZ4 195 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 PIK3IP1Q96FE7 263 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 LRRC46Q96FV0 321 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 TLNRD1Q9H1K6 362 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 RAB18Q9NP72 206 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 NDRG3Q9UGV2 375 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 KCNS2Q9ULS6 477 aa6.97□□□□□ -1.29
RAB5B-210ENST00000553116 MEX3AA1L020 520 aaKnown RBP6.96□□□□□ -1.29
RAB5B-210ENST00000553116 SHOXO15266 292 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 CFDP00746 253 aaPredicted RBP6.96□□□□□ -1.29
RAB5B-210ENST00000553116 EGR1P18146 543 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 CYCSP99999 105 aaKnown RBP6.96□□□□□ -1.29
RAB5B-210ENST00000553116 SRSF7Q16629 238 aaKnown RBP eCLIP6.96□□□□□ -1.29
RAB5B-210ENST00000553116 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 CMTM1Q8IZ96 169 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 LHFPL5Q8TAF8 219 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 MFFQ9GZY8 342 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 TAF9BQ9HBM6 251 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 KIF25Q9UIL4 384 aa6.96□□□□□ -1.29
RAB5B-210ENST00000553116 PCDHB10Q9UN67 800 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms